| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3097 |
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| Symbol | |
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| ID | 3904223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3668299 |
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| End bp | 3670098 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880418 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_482183 |
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| Protein GI | 86741783 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.658552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.476459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGAGT ACACCTCCCC GCCCCTGGTC ACCATCGCCG ACGATGCGAC CCTGACGGAC
GCCGTGTTCC GCAACGCGGC GGCACATCCG GACAGTACGC TTATCCAACA CAAGATCGAC
GACGAGTTCG TCGGCATGAC CGTCCGCGAG TTCCACGATC ACGTCGTGGC CACCGCCCGG
GGCTTCATCG CCCGCGGGGT GCGGCCCGGG GACCGCGTCG GTCTGGCGAG CCGGACCCGG
TTCGAGTGGA CGATTGTCGA CTACGCGGCG TGGCTGGCCG GAGCCGTCTG CGTGCCGATC
TACGAGACCT CCAGCCCGGG CCAGATCGAG TGGATCCTGC GGGACGCCGG CGTCGAGGTT
CTCGTGGTCG AAAACGACGA GCTCGCCGAG CGGGTCGCAC AGATACGCGA CGGGGTCCCC
GCGCTGCGGG AGGTCCTCGT CATCGAGCAC GGGGCGCTGG CCGGTCTCGC CGTGGACGGC
GCAGGCATCG CGCCGGAGCG GCTGACGGCG GCCCGGGCGT CCGTCAACGC CGACAGCCTC
GCGACGATCA TCTACACCTC GGGGACCACC GGCCAACCGA AGGGCTGCGA GATCACCCAT
CGCGCCCTGC TGTTCACCGC CGAGGCGGCC ATCGCCACGC TGCCCGAGCT GTTCGCGCCC
GGTGCGTCCA CACTGCTGTT CCTCCCGCTG GCGCACGTGT TCGCCCGCAT GCTCCAAGTG
GGCGTGGTCC AGGGGGCGTT CACCCTCGCC TACACCCCGG ACTCGCGGAC CCTGCTGCCC
GATCTCGCCA AGGTACGCCC GACCTTCCTG CTCTCCGTGC CCCGGGTGTT CGAGAAGGTG
CACGCCGGGG CACGCCACAA GGCGCACGCC GAGGGCAGGG GTTGGATCTT CGACGCCGCC
GAGAACACCG CGGTCGCCTA CAGCCGGGCT CTCGACGGCG GCGGCCCCGG CCTGCTCCTG
CGGCTGCGGC ACCGGCTGTT CGCCGCGCTG GTCTACGGCA AGCTCCAGGC TGCGCTCGGT
GGGCGGGCCC GCTACGCGGT CAGCGGCGGG GCGCCGCTGG GTGAACGCCT CGGCCACTTC
TTCCGCGGGA TCGGGTTCAC GGTGCTCGAA GGCTACGGTC TGACCGAGAC CAGCGCGCCG
GCCGCGGCGA ACCGGCCGGG CAACGTCCGC ATGGGCACCG TCGGCCAGCC CTTTCCTGGC
GTGACGATCG CCATCGCCGA TGACGGGGAG ATCCTCATCC GCGGTCCCCT GCTGTTCCGC
GGCTACCGCA ACAACGAGCT CGCGACGAAG GAGGCGCTCG ACGCCGAGGG CTTCCTGCAC
ACCGGCGACC TCGGCGACCT CGACGCCGAC GGCTTCCTGC GGATCACCGG CCGCAAGAAG
GAGCTGCTGG TCACCGCCGG TGGGAAGAAC ATCGCACCGG CGCCACTGGA GCACATCATC
CAGTCCCATC CCCTGGTCAG CCAGGCGATG CTGATCGGGG ACCGGCGGCC CTTCGTCGCC
GCCCTCGTCA CGCTCGATCC CGAGGCGTTC GACCGGTGGC GGTCCTCGGC GGGCAAGCCG
GCCGGCGCGA CGGTTGCCGA CCTGATCGAC GACGCCGGCC TGCGCACCGA GATCCAGAAT
GCGATCGACG CCGCGAACGC GACAGTGTCG CATGCCGAGA GCATCAAGAA GTTCGCGATC
CTGCCGCAGG ACTTCACGGT GGAGACCGGC GAGCTCACCC CGAGCCTGAA GGTGCGCCGC
TCGCTGGTGC TCGACCGGTT CAGCCAGGCG GTGGAGGACA TCTACGCTAC CCCGCGCTAA
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| Protein sequence | MREYTSPPLV TIADDATLTD AVFRNAAAHP DSTLIQHKID DEFVGMTVRE FHDHVVATAR
GFIARGVRPG DRVGLASRTR FEWTIVDYAA WLAGAVCVPI YETSSPGQIE WILRDAGVEV
LVVENDELAE RVAQIRDGVP ALREVLVIEH GALAGLAVDG AGIAPERLTA ARASVNADSL
ATIIYTSGTT GQPKGCEITH RALLFTAEAA IATLPELFAP GASTLLFLPL AHVFARMLQV
GVVQGAFTLA YTPDSRTLLP DLAKVRPTFL LSVPRVFEKV HAGARHKAHA EGRGWIFDAA
ENTAVAYSRA LDGGGPGLLL RLRHRLFAAL VYGKLQAALG GRARYAVSGG APLGERLGHF
FRGIGFTVLE GYGLTETSAP AAANRPGNVR MGTVGQPFPG VTIAIADDGE ILIRGPLLFR
GYRNNELATK EALDAEGFLH TGDLGDLDAD GFLRITGRKK ELLVTAGGKN IAPAPLEHII
QSHPLVSQAM LIGDRRPFVA ALVTLDPEAF DRWRSSAGKP AGATVADLID DAGLRTEIQN
AIDAANATVS HAESIKKFAI LPQDFTVETG ELTPSLKVRR SLVLDRFSQA VEDIYATPR
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