| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3096 |
|---|
| Symbol | |
|---|
| ID | 3904222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3667223 |
|---|
| End bp | 3668080 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637880417 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_482182 |
|---|
| Protein GI | 86741782 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.945207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGGA TCCGCACGGC ATCCCTCATC GGCCGGATGG ACCGTTCGAG TAGGGGCGAC
GGACCCCTGT CGGCGCCTAA GCTTCCAGCC ATGCGGGTCC ACGTGGTCAG CGACGTGCAC
GGGCGGGCGG ATGCGCTGGC GGCGGCGGGC GAGGGGGCCG ACGCGTTCGT GTGTCTGGGT
GATCTCATCC TCTTCATCGA CTACCACGAT CACGGCCGGG GCATCATGGG CGACCTGTTC
GGCGCCGAGG CCGTGGGTCG CATGATCGAG TTGCGTAACG CCCAGCGGTT CGACGAGGCC
CGGGAATGGT CCCGGACGCT GTGGGCGAGC CTGGGCGGGG ACCGTACGCA GATCGTGGAG
GCGGCCATCC GCCGTCAGTA CGAGGCGCTG TTCGCGGCGT TCCCGACCCC GACCTACCTG
ACCTTCGGCA ACGTCGATCT GCCGCACCTG TATCCCGAGT ACCTGCGCGA CGGCGTCACC
CTGCTGGACG GGCAGACCAC CACGATCGGG GGGTTGCGGT TCGGCTTCGT CGGCGGGGGG
CTACAGACCC CGATGCGCAC CCCCTACGAG ATTGACGACG ACGCCTTCGC CGCCAAGGTC
GCCGCGGTGG GCGAGGTCGA CGTCCTGTGC TGCCACATCC CCCCGCACAT CCCCGAGCTG
GTCTACGACA TCGAGGCACG CCGCTTCGAG CGCGGCAGTG TGGCGATCCT CGAAGCCATT
CACGCGACCC GGCCGCGCTA CGTGCTCTTC GGGCATGTGC ACCAGCCGTT GACGGCCAGC
CTGGAGATCG ACGGCACACG CTGCGTGAAC GTCGGACATT TCCATGCTCG GGGGACGCCC
TTCGTTCTTG AGTGGTAG
|
|---|
| Protein sequence | MPGIRTASLI GRMDRSSRGD GPLSAPKLPA MRVHVVSDVH GRADALAAAG EGADAFVCLG
DLILFIDYHD HGRGIMGDLF GAEAVGRMIE LRNAQRFDEA REWSRTLWAS LGGDRTQIVE
AAIRRQYEAL FAAFPTPTYL TFGNVDLPHL YPEYLRDGVT LLDGQTTTIG GLRFGFVGGG
LQTPMRTPYE IDDDAFAAKV AAVGEVDVLC CHIPPHIPEL VYDIEARRFE RGSVAILEAI
HATRPRYVLF GHVHQPLTAS LEIDGTRCVN VGHFHARGTP FVLEW
|
|---|
| |