Gene Francci3_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3089 
Symbol 
ID3904215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3660736 
End bp3661533 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID637880410 
Productputative esterase/lipase 
Protein accessionYP_482175 
Protein GI86741775 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTG TCACCGGTGC GGCCGTCCTC CCGGGCGCGG AACCGTTCGA GTTCGAGGGT 
GGGTCGGTCG GCGTGCTGCT GGTCCACGGG TTCACCGGCT CCCCGGGCAG CATGCGGCCC
TGGGGCGAGT ACCTCTCCGC AGTCGGACTG ACAGTCTCGT GCCCGCTGCT GCCCGGCCAT
GGCACCCGCT GGCAGGACAT GGTGCCCACT ACCTGGCCGG ACTGGTACGC TACGGCGGAG
ACCGCGTTTC TGCGGCTGCG GACCACCTGC GAGCAGGTCT TCGTCATGGG GCTGTCGATG
GGCGGGACCC TGGCCCTGCG GCTGGCCGAG CAGCACGGCG GGGACCTCGC CGGCCTCGTC
ACGGTGAATC CCAGCCTCAC CACCGACCGG TGGCACGCGG CGTTCGCCCC GCTGCTGAGC
CGGGTGATCC CCGCCGTGCC TGGCGTGGCT GGCGACGTGA AGGCCGAGGG CGTGCCCGAG
GTCGGTTACG ACCGGGTACC CCTGCGCCCG TTCGCGTCGC TGCGCCAACT GTGGGCGGTG
ACCCGGCCGG AGCTCGGTCG GATCGTCTGT CCGGTCCTCA CCTACCGCAG CGTCGTCGAC
CATGTGGTGG AAGCCAGCTC CGGCGCGATT CTGCTGGCCG GGCTGCGCGC CCCGGCCGAA
GAACGACTGT TGGAGAACAG TTACCACGTC GCGACGCTCG ACAACGACCG AGAAACGATC
TTCGACGGAA GTCTGGAATT CGTCCGGCGG CACGCGCCAC GCGCGCTCGT GCCCGACGCG
CCCTGCGGCG ATGACTGA
 
Protein sequence
MAGVTGAAVL PGAEPFEFEG GSVGVLLVHG FTGSPGSMRP WGEYLSAVGL TVSCPLLPGH 
GTRWQDMVPT TWPDWYATAE TAFLRLRTTC EQVFVMGLSM GGTLALRLAE QHGGDLAGLV
TVNPSLTTDR WHAAFAPLLS RVIPAVPGVA GDVKAEGVPE VGYDRVPLRP FASLRQLWAV
TRPELGRIVC PVLTYRSVVD HVVEASSGAI LLAGLRAPAE ERLLENSYHV ATLDNDRETI
FDGSLEFVRR HAPRALVPDA PCGDD