Gene Francci3_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3085 
Symbol 
ID3904211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3655978 
End bp3657003 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content70% 
IMG OID637880406 
Product6-phosphofructokinase 
Protein accessionYP_482171 
Protein GI86741771 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID[TIGR02483] phosphofructokinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCG GCGTACTGAC CGGCGGCGGC GACTGCCCGG GACTCAACGC GGTGATCCGG 
GCCGTCGTGC GCAAGGGAGA GAGCGTCTAC GGCCACAGCT TTGTCGGGTA CCGGGACGGC
TGGCGAGGGC CGCTGACCGG CGAGACGGTC CCCTTGGACA TCGCGGCCGT GCGGGGGATC
CTCCCGCGTG GCGGCACGAT CCTCGGCTCC AGCCGCACCA ATCCCTACGC CGCCGTGGAC
GGGCCGGCGC TGGTGCGCGA GCACCTCGCC GCAGCCGAGG TGGACGCGCT CATCGCGATC
GGCGGGGAGG ACACCCTGGG GGTGGCCGCC CAACTACACG CCGAGGGACT GCCCGTGGTC
GGAGTGCCCA AGACCATCGA CAACGACCTC TCCGCGACGG ACTACACCTT CGGTTTCGAC
ACCGCGGTCA ACATCGCCAC GGAGGCGATC GACCGGCTGC ACACCACCGC GGAAAGCCAT
CACCGGGTGT TGATCGTTGA GGTCATGGGC CGTCATGCCG GGTGGATCGC TCTGCACAGC
GGCATGGCGG GGGGAGCCAA CGTCATTCTC ATCCCGGAGC GGCCGTTCGA CTTCGACAAG
GTGTGCGCCT TCGTCGAAGC CCGGTTCGCC ACCCACTACG CGCCGATCAT CGTCGCGGCC
GAGGGTGCCG TCCCGATCAC GGGTACCCTG GTCGCCAGGG AGGGTGAGGT CGATGCCTTC
GGGCATGTCC GCCTGCAGGG CATCGGGGCG GTCCTGGAGA CCGAGATCCG CGCCCGCACC
GGTCGTGACG CGCGCGCGAC GGTGCTCGGG CATCTGCAGC GCGGCGGCAC GCCCACGGCC
TTCGATCGAT GGCTCGCGAC GCGTTTCGGA CTGCACGCCG TCGACGCCGT GCACGAAGGC
GACTTCGGGG TGATGGTCGC CCTGCACGGC ACCCGCATCG ACCGGGTTCC GCTGCAGGAT
GCGACCCGCG AGCTCAAGAC GGTGCCCGAG GAGCTCTACC ACGAGGCCGA GATCTTCTTC
GGCTGA
 
Protein sequence
MRIGVLTGGG DCPGLNAVIR AVVRKGESVY GHSFVGYRDG WRGPLTGETV PLDIAAVRGI 
LPRGGTILGS SRTNPYAAVD GPALVREHLA AAEVDALIAI GGEDTLGVAA QLHAEGLPVV
GVPKTIDNDL SATDYTFGFD TAVNIATEAI DRLHTTAESH HRVLIVEVMG RHAGWIALHS
GMAGGANVIL IPERPFDFDK VCAFVEARFA THYAPIIVAA EGAVPITGTL VAREGEVDAF
GHVRLQGIGA VLETEIRART GRDARATVLG HLQRGGTPTA FDRWLATRFG LHAVDAVHEG
DFGVMVALHG TRIDRVPLQD ATRELKTVPE ELYHEAEIFF G