Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3082 |
Symbol | |
ID | 3904284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3651363 |
End bp | 3652142 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637880403 |
Product | hypothetical protein |
Protein accession | YP_482168 |
Protein GI | 86741768 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.646267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAC TCGACGGCCA CCCGGTCACC CCTGAGGCGC TCGCGGCGCT GGCCCTGACC AACCTCGGGC ACTTCACCTC GATGCGCGTC GATGATGGCC GGGTACGGGG CCTGCCGCTG CACCTGAGCC GGCTGGTCCG TGACTGCCGC ATCGTCTTTG CAGCCGACCT CGATCCGGAA CACGTCCTGA AGCTGGTCCG TCACGCGGTC GGAGGCAGAA CCGGCTCGCT CGTCGTCCGC GTCACCGTCT TCGACCCAGC ACTGGAACTC GGGCACCCGG GTGCGACGGC CGCTCCACAC ATCCTGGTGA CCACTCGACC GGTCGCGCCG ACCGTGTTGC CGGCGCTACG CGTGAAGGCC TGCGTCTACT TGCGGGATCT TCCGATGGTG AAACACGTCG GCCTGTTCGG CTCTCTGTAC CATCGCCGCG GTGCCCAACT CGACGGCTAT GATGATGCGC TGTTCACCGA TCCCACAGGA GTCGTCTCCG AAGGCGCCAC CTGGAACGTC GGTTTCTTTG ATGGCGACAA CGTCATCTGG CCCAAAGCCG ACGTCCTGCC TGGAGTAACC ATGGGACTCC TGCAGCAGGT CGGCACTCAC GTCACCGCCC CTGTTACCCT GGATATGCTC GGCAGCATGC AGGCGGCTTT TGCTACTAAC ACTTCGATCG GCGTCCGCCC GATCCACATG ATTGATGGTG TGAACCTTCT CGACGACCAT CCAATTCTAC GGGAACTCCA TGCCACCTAT ATCGCCATCC CCGGCGATTC CCTGGAGTAG
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Protein sequence | MAELDGHPVT PEALAALALT NLGHFTSMRV DDGRVRGLPL HLSRLVRDCR IVFAADLDPE HVLKLVRHAV GGRTGSLVVR VTVFDPALEL GHPGATAAPH ILVTTRPVAP TVLPALRVKA CVYLRDLPMV KHVGLFGSLY HRRGAQLDGY DDALFTDPTG VVSEGATWNV GFFDGDNVIW PKADVLPGVT MGLLQQVGTH VTAPVTLDML GSMQAAFATN TSIGVRPIHM IDGVNLLDDH PILRELHATY IAIPGDSLE
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