Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3074 |
Symbol | |
ID | 3904275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3641603 |
End bp | 3642838 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637880395 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_482160 |
Protein GI | 86741760 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGAA TAGTCGTCGT GGGCGCGGGA ATGGCGGGGG GCCGGGCCGC CGCCGAGGTG CGCGCGCGTG GTTTCGCGGG AGAGGTGATC CTGCTCGGGG CGGAGCCGCA CCGGCCCTAC GATCGTCCGC CGCTGTCCAA GGCGGTGCTC TCCGGCCGCA TCGACGACAC GACGTTGCCC TTCGACCTCG ACGGGGTCGA GGTGCGCCTC GGACGGCGGG CGACGGGCCT GCGACCGGGC ACTGTGGAGA CCGACGCGGG GCCGCTGGAC TACGACGGCC TGGTGCTGGC GACGGGAGCC GACCCGGTAA CCCTGCCGGG CGACGGCCCA CAGCGGGTCC TGCGTTCCAT TGACGACGCC CGGGATCTGC GTGGCGCCCT GCGTCCCGGC GTCCGGCTCG TCATCGTTGG TGCCGGCTGG ATCGGCGCGG AGGTCGCCAC GGCGGCGGCA GCGATCGGTG CCGAGGTCAC CGTCGTGGAG GCAGCCGCCT CGCCGCTGTT CGCCGCGCTC GGCGCGCAGG TGGGCCGGTG CACGATCGCG TGGTACGCCC GGGCCGGGGT TACCCTGCGC CTGGCCACGG CCGTGGAGCG GGTCACCCCC GACGGGCTGG TGCTGGCTGG CGGTGAGGAG CTGATTGCGG ACGAGGTTGT CGTCGGCGTC GGGGTGCGGC CCGGCACCGC CTGGCTCGCC GGTTCCGGGC TCGCCCTCGA CCGGGGAGTC GTGGTTGACG AGCATCTCGC CGCCCGGTGG ACCCATGGTG CCGACGGTGC CGACGGCGAC CGGCCGCCGG TGGTCGCGGT CGGTGACTGT GCTGCTTGGT GGTCGCGTCG CTACGGTCGG CGGCTGCGGG TCGAGCACTG GGACTGCGCC CAGCAGTCGC CCGCGGTCGC GGTCAGCACG CTGCTCGGCG GGGAGGCCGT CTATGACCCG GTGCCCTACT TCTGGTCGGA ACAGTTCGGC CGCATGGTGC AGTTCGCGGG ACTCCCTTCG GCAGAGGCTG CCCCGGTGTT CCGGGGCGAT CCGGGCGTCG TCGTGCCGCC CGACGGCGGG CGTCCGTCTG GCTGGTCGGC CGGGTGGTTC GCCCCGGACG GCCGTCTCGA GGCGCTGGTC ACTGTGGGGC GCCCGATGGA CATGGTCGCC GGTCGCCGGT TGATGGCGGC CGACGGTATC CCGGATCGGG AGCGTTTCGC CGATATCTCC GTGTCGATGA AGGAACTGGC CGCGGCAAGT CGATGA
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Protein sequence | MQRIVVVGAG MAGGRAAAEV RARGFAGEVI LLGAEPHRPY DRPPLSKAVL SGRIDDTTLP FDLDGVEVRL GRRATGLRPG TVETDAGPLD YDGLVLATGA DPVTLPGDGP QRVLRSIDDA RDLRGALRPG VRLVIVGAGW IGAEVATAAA AIGAEVTVVE AAASPLFAAL GAQVGRCTIA WYARAGVTLR LATAVERVTP DGLVLAGGEE LIADEVVVGV GVRPGTAWLA GSGLALDRGV VVDEHLAARW THGADGADGD RPPVVAVGDC AAWWSRRYGR RLRVEHWDCA QQSPAVAVST LLGGEAVYDP VPYFWSEQFG RMVQFAGLPS AEAAPVFRGD PGVVVPPDGG RPSGWSAGWF APDGRLEALV TVGRPMDMVA GRRLMAADGI PDRERFADIS VSMKELAAAS R
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