| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3053 |
|---|
| Symbol | |
|---|
| ID | 3904254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3619491 |
|---|
| End bp | 3619949 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637880374 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_482139 |
|---|
| Protein GI | 86741739 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCG AGGTTGGCTC CGTCGCCCCG GACTTCTCGC TGAAGGACCA GAACAACGAG
GTTGTCACGC TGTCCGAGTT CCAGGGTAAG CGCAACGTGG TCCTGTTGTT CTACCCGTTG
ACCTTCACCG GCGTCTGCCA GGGCGAGCTG TGCTCCGTGC GGGACGATCT CGCTTCGTTC
CAGAACGACG ACGTCCAGGT GCTGGCCGTG TCGGTCGACT CGCCGTTCGC CCACAAGGTC
TGGGCCGACC AGCAGGGCTA CGAGTTCCCG CTGCTCGCCG ACTTCTGGCC GCACGGCGCC
GTCGCGAGCG CGTACGGCGT CTTCAACGCG GAGCGGGGCA TCTCCCTGCG GGGCACCTTC
GTCATCGACA AGGAGGGTGT TGTCCGCTGG AAGGTCGTCA ACAACATCCC CGACGCGCGG
GACCAGGCCG AGTACCTCAA GGCGCTCGCC ATCCTCTAA
|
|---|
| Protein sequence | MAVEVGSVAP DFSLKDQNNE VVTLSEFQGK RNVVLLFYPL TFTGVCQGEL CSVRDDLASF
QNDDVQVLAV SVDSPFAHKV WADQQGYEFP LLADFWPHGA VASAYGVFNA ERGISLRGTF
VIDKEGVVRW KVVNNIPDAR DQAEYLKALA IL
|
|---|
| |