Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3035 |
Symbol | |
ID | 3904388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3601674 |
End bp | 3602465 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637880355 |
Product | hypothetical protein |
Protein accession | YP_482121 |
Protein GI | 86741721 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.644185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACGGG TGATTGTCAC AGTTGTGCCA CAGCCGCCGA GACGATGCCG ATCGTCAACA CCGTGCTGTA ATGCCCCCAT GGCGACATTC GGTGCGGTGC GGCGGCACCG GGAGCGGCAC AGCACGAACC GTTCGGGCTG GCTGCGCGCG GCCGTCCTCG GCGCGAACGA CGGCCTGGTC TCCACCTCCA GTCTCATCGT CGGCGTCGCC GCGAGCGGCG CCTCCACCGG CGCGGTCCTG ACCGCCGGGA TCGCGGGTCT GACCGCGGGG GCGATGTCGA TGGCGGCCGG GGAGTATGTG TCGGTGAGCT CCCAGGCCGA CGTGGAACGC GCGGACCGGG CCAAGGAGAG CGCGGAGCTG GCGGCCGACC CGGTGGCCGA GCTTGCCGAG CTGGTCGGCA TCTACGAGCG GCGCGGCCTT CCGCGCGACC TCGCCACGCA GGTCGCCGTG ACACTGACCG AGCGGGGTGC GCTGGAGGCG CACCTGCGCG ACGAACTCGG CCAGAGTGAG GCCACCCGGG CGCGCCCGGT CCAGGCCGCC GTCGCGTCGG CGGGCAGCTT CACGGCCGGC GGGCTGGTGC CGTTCCTCGG GATGTCGGCC CCGGCGGGGG CGGGCCGCCT GATGCTCGTC GTCGTGGTTA CGGTGATCGG TCTCGCCGTC GCGGGCATAC TCGCCGCGCG GGCCGCCGGT ATGGCGCTGC TGCGTCCGAC CCTGCGCGTC GTGCTGGGCG GCGCCGCGGC CATGCTGGTC ACCGCGCTGG TCGGTCTGAT CACCGATGCG GCCGGCGGCT GA
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Protein sequence | MERVIVTVVP QPPRRCRSST PCCNAPMATF GAVRRHRERH STNRSGWLRA AVLGANDGLV STSSLIVGVA ASGASTGAVL TAGIAGLTAG AMSMAAGEYV SVSSQADVER ADRAKESAEL AADPVAELAE LVGIYERRGL PRDLATQVAV TLTERGALEA HLRDELGQSE ATRARPVQAA VASAGSFTAG GLVPFLGMSA PAGAGRLMLV VVVTVIGLAV AGILAARAAG MALLRPTLRV VLGGAAAMLV TALVGLITDA AGG
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