Gene Francci3_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3035 
Symbol 
ID3904388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3601674 
End bp3602465 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content74% 
IMG OID637880355 
Producthypothetical protein 
Protein accessionYP_482121 
Protein GI86741721 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.644185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACGGG TGATTGTCAC AGTTGTGCCA CAGCCGCCGA GACGATGCCG ATCGTCAACA 
CCGTGCTGTA ATGCCCCCAT GGCGACATTC GGTGCGGTGC GGCGGCACCG GGAGCGGCAC
AGCACGAACC GTTCGGGCTG GCTGCGCGCG GCCGTCCTCG GCGCGAACGA CGGCCTGGTC
TCCACCTCCA GTCTCATCGT CGGCGTCGCC GCGAGCGGCG CCTCCACCGG CGCGGTCCTG
ACCGCCGGGA TCGCGGGTCT GACCGCGGGG GCGATGTCGA TGGCGGCCGG GGAGTATGTG
TCGGTGAGCT CCCAGGCCGA CGTGGAACGC GCGGACCGGG CCAAGGAGAG CGCGGAGCTG
GCGGCCGACC CGGTGGCCGA GCTTGCCGAG CTGGTCGGCA TCTACGAGCG GCGCGGCCTT
CCGCGCGACC TCGCCACGCA GGTCGCCGTG ACACTGACCG AGCGGGGTGC GCTGGAGGCG
CACCTGCGCG ACGAACTCGG CCAGAGTGAG GCCACCCGGG CGCGCCCGGT CCAGGCCGCC
GTCGCGTCGG CGGGCAGCTT CACGGCCGGC GGGCTGGTGC CGTTCCTCGG GATGTCGGCC
CCGGCGGGGG CGGGCCGCCT GATGCTCGTC GTCGTGGTTA CGGTGATCGG TCTCGCCGTC
GCGGGCATAC TCGCCGCGCG GGCCGCCGGT ATGGCGCTGC TGCGTCCGAC CCTGCGCGTC
GTGCTGGGCG GCGCCGCGGC CATGCTGGTC ACCGCGCTGG TCGGTCTGAT CACCGATGCG
GCCGGCGGCT GA
 
Protein sequence
MERVIVTVVP QPPRRCRSST PCCNAPMATF GAVRRHRERH STNRSGWLRA AVLGANDGLV 
STSSLIVGVA ASGASTGAVL TAGIAGLTAG AMSMAAGEYV SVSSQADVER ADRAKESAEL
AADPVAELAE LVGIYERRGL PRDLATQVAV TLTERGALEA HLRDELGQSE ATRARPVQAA
VASAGSFTAG GLVPFLGMSA PAGAGRLMLV VVVTVIGLAV AGILAARAAG MALLRPTLRV
VLGGAAAMLV TALVGLITDA AGG