Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3021 |
Symbol | |
ID | 3904374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3587552 |
End bp | 3588049 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637880341 |
Product | phosphoribosyl-AMP cyclohydrolase |
Protein accession | YP_482107 |
Protein GI | 228965402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.827425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0714596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCATTC GCCCTTCCGC TCTGGATCCC GCCATCGCCC GTAGGCTGCG CCGCAACGAC GCGGGCCTGT TCCCCGCCGT CGCCCAGCAG TACGACACCG GCGAGGTGCT GATGCTCGGG TGGATGGACG ACGAGGCGCT GCACCGGACC CTCACCACGG GCCGGGCCAC GTACTGGAGC CGCAGCCGCG CGGAGTACTG GGTCAAGGGG GAGACCAGCG GGCACCGGCA ATGGGTGCGG TCGGTCGCGC TCGACTGCGA CGGGGACACC GTCCTCGTCC GGGTGGACCA GGTGGGCCCG GCCTGCCACA CGGGCACGCG GACCTGCTTC GACGGCAATC TTCTGCCCAC GGTGACCGTC GAGGCCGCGG ATACCGCCCG GCCCCGCGAC CTCTCCGGTG CCGCCAGCGT TTCCGGTGCC GCCAGCGTTT CCGGTGCCGC CGGTGACCCC GCTGGCGTGG ACAGGGCCGG CGTGAGCAAG GCCGGCGCGG ACCGATGA
|
Protein sequence | MTIRPSALDP AIARRLRRND AGLFPAVAQQ YDTGEVLMLG WMDDEALHRT LTTGRATYWS RSRAEYWVKG ETSGHRQWVR SVALDCDGDT VLVRVDQVGP ACHTGTRTCF DGNLLPTVTV EAADTARPRD LSGAASVSGA ASVSGAAGDP AGVDRAGVSK AGADR
|
| |