Gene Francci3_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3021 
Symbol 
ID3904374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3587552 
End bp3588049 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content73% 
IMG OID637880341 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_482107 
Protein GI228965402 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.827425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0714596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATTC GCCCTTCCGC TCTGGATCCC GCCATCGCCC GTAGGCTGCG CCGCAACGAC 
GCGGGCCTGT TCCCCGCCGT CGCCCAGCAG TACGACACCG GCGAGGTGCT GATGCTCGGG
TGGATGGACG ACGAGGCGCT GCACCGGACC CTCACCACGG GCCGGGCCAC GTACTGGAGC
CGCAGCCGCG CGGAGTACTG GGTCAAGGGG GAGACCAGCG GGCACCGGCA ATGGGTGCGG
TCGGTCGCGC TCGACTGCGA CGGGGACACC GTCCTCGTCC GGGTGGACCA GGTGGGCCCG
GCCTGCCACA CGGGCACGCG GACCTGCTTC GACGGCAATC TTCTGCCCAC GGTGACCGTC
GAGGCCGCGG ATACCGCCCG GCCCCGCGAC CTCTCCGGTG CCGCCAGCGT TTCCGGTGCC
GCCAGCGTTT CCGGTGCCGC CGGTGACCCC GCTGGCGTGG ACAGGGCCGG CGTGAGCAAG
GCCGGCGCGG ACCGATGA
 
Protein sequence
MTIRPSALDP AIARRLRRND AGLFPAVAQQ YDTGEVLMLG WMDDEALHRT LTTGRATYWS 
RSRAEYWVKG ETSGHRQWVR SVALDCDGDT VLVRVDQVGP ACHTGTRTCF DGNLLPTVTV
EAADTARPRD LSGAASVSGA ASVSGAAGDP AGVDRAGVSK AGADR