| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3013 |
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| Symbol | |
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| ID | 3904366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3574965 |
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| End bp | 3579521 |
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| Gene Length | 4557 bp |
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| Protein Length | 1518 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880333 |
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| Product | glutamate synthase (NADH) large subunit |
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| Protein accession | YP_482099 |
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| Protein GI | 86741699 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0945186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGTG CGCAAGGTCT TTACGACCCC ACCTTCGAAC ACGATGCCTG TGGCGTCGGC
TTCGTCGTCG ATGTACACGG CAGGCGCAGT CACGAGCTGG TCGAGCAGGG CCTGACCGTG
CTGCGTAACC TCGACCACCG GGGTGCCTCG GGCAGCGACC CGGACACCGG CGACGGAGCC
GGCATCCTGG TGCAGGTCCC CGACCTGTTC CTGCGTGACG TCGTCGACTT CACGCTGCCC
GCCCCGGGGC GTTACGCCGT CGGGATCGCC TTCCTGCCGC AGGTCTCGGG GGAGCGGGAC
GAAGCCGTGC GCACCATCAG CCGCATCGTC CGCCAGGAGG GGCTGCGGGT CCTCGGCTGG
CGTGAGGTGC CGGTCGTCAG CCACATCGTC GGGCACGCGG CCCACGAGGT TGAGCCGCGG
ATGCGGCAGC TGTTCCTCGC ATTGCCCGGC AGTCTGCCCG CCGCCGGTCC GGTTGAGGGC
GGCGCGGGGA ACGGGTTCGA CCAGGCCGAC CTCGAACGTC GGGCGTTCTG CGCCCGCAAG
CGGATCCGCC GGGAGACCGG CGTCTACCTG GCGTCGCTGT CGTCGCGGAC CCTGGTCTAC
AAGGGGATGC TCACCACCCA CCAGCTCTCG GCCTACTTTC CCGACCTCGA CGACCCCCGG
TTCACCAGTG CCATCGCGCT GGTGCACAGC CGGTTCTCCA CGAACACCTT CCCGAGCTGG
CCGCTGGCGC ACCCGTACCG GTTCGTCGCC CACAACGGGG AGATCAACAC TGTCCGCGGG
AACCGGAACT GGATGCGGGC CCGCGAGGCG CTGCTCGCCA GCGACCTGAT CCCCGGTGAC
CTCTCCCGGC TGTTCCCCGT CTGCGCGGAC GGGGCGAGCG ACTCGGCGAG CTTCGACGAG
GTCCTGGAAC TGCTGTACCT GGGCGGTCGC AGCCTGCCGC ACGCGGTGCT GATGATGATC
CCCGAGGCGT GGGAGAACCA CACCGAGATG GACCCGGCGC TGCGCGCCTT CTACCAGTTC
CACTCCACGC TGATGGAGCC GTGGGACGGC CCGGCCTCCA TCGCGTTCAC CGACGGGACG
GTCATCGGGG CGGTGCTCGA CCGTAACGGG CTGCGGCCCT CGCGGTACTG GGTCACCGAC
GACGGCCTGG TCGTGATGGC CTCCGAGGTG GGCGTGCTCG ACATCCCGCC GCACAAGGTG
GTGCAGAAAG GCCGGCTCCA GCCGGGGCGG ATGTTCCTGG TGGATACCGC CGAGGGGCGC
ATCGTCAGCG ACGAGGAGAT CAAGTCCGAG CTCGCGAACG CGGCGCCGTA CGCGGAGTGG
TTGCACGCCG GTCTGATCGA GCTGGACGAC CTGCCCGAGC GGGAGCAGCT CCTCTACGGG
CACTCCTCGG TGCTGCGTCG CCAGCAGGTG TTCGGCTACA CGCTGGAGGA GCTGCGCGTG
CTCGTCGCGC CGATGGCGCG CACGGGCGCG GAGCCGATCG GCTCGATGGG CACCGACACG
CCGGTGGCGG TGCTCTCCAG CCGTCCCCGG CTGCTGTTCG ACTACTTCAC CCAGTTGTTC
GCGCAGGTCA CCAACCCGCC GCTGGACGCG ATCCGCGAGG AGTTGGTGAC GAGCCTGGGC
CGGGTGCTCG GCCCGGAGGG CAACCTGCTC GCGCCATCCC CGGCGTCCTG CCGGATGGTG
CACCTGCCCT ATCCGGTGAT CAGCAGCAGC CAGCTTTCGA AGATCATCGG CATCAACGAC
GACGGTGACA TGCCCGGCTT CGCCTCGGTG ACGGTCCGTG GCCTGTATGA CGTCGACGGG
GGCGGCGCGG CGCTCGCCGC CCGGCTGGCG GAAATCTGCG CCGGGGTCAG CGAGGCCATC
GCCGACGGTG CCCGCATCGT CGTGCTCTCC GACCGGGACT CCGACACGCG CAAGGCCCCG
ATCCCGTCGC TGCTGCTGAC CGCCGCCGTG CACCACCACC TGATCCGGGA GCGGACCAGG
ACGAAGGTCG GCCTCATCGT CGAGTGCGGC GACGCCCGTG AGGTGCACCA CATCGCGCTG
CTCACCGGCT ACGGCGCCGC GGCGGTCAAC CCGTACCTGG CATTCGAGTC GATCGACAGC
CTCATCGCCG AGGGCGAGAT CGTCGGGGTG TCCCGGGAGC AGGCCGAGAA GAACATGATC
AAGGCGCTCG GCAAGGGCGT GCTGAAGGTG ATGTCCAAGA TGGGCATCTC GACGGTGGCG
AGCTACACCG GTGCCCAGGT CTTCGAGGCG ATCGGGCTGT CCCAGGAACT GATCGACGCC
TATTTCGCGG GTACCCCGTC GCGCCTCGAC GGCATCGGAC TCGACGTCAT CGCGGCGGAG
GTGGCAGCGC GGCACCGGCG GGCCTACCCG CCGATCGCCT CCGAGCACGC GCACCGCACG
CTGGAGGTCG GCGGCGAGTA CCAGTGGCGC CGCGAGGGTG AGCTGCACCT GTTCAACCCG
GAGACCGTCT TCCTGCTCCA GCACGCCACC CGCACCCGGC AGTACGAGAC CTTCCAGAAG
TACACCGCCC GGGTCGACGG TCTGTCCCGG GAGAACGCGA CGCTGCGGGG TCTGTTCGAG
CTGCGTACCG GGGTGCGCAC GCCGGTGCCG ATCGAGGAGG TCGAGCCGGC CTCGGAGATC
GTCAAGCGGT TCGCGACCGG TGCCATGTCC TACGGCTCGA TCAGCGCCGA GGCGCACGAG
ACGCTGGCTA TCGCCATGAA CCGGCTCGGC GGGAAGTCGA ACACCGGCGA GGGCGGCGAG
GACGCGGAGC GGTTCACGCC GGACGCGAAC GGGGACCTGC GCCGCTCCGC GGTCAAGCAG
GTCGCCAGCG GCCGGTTCGG GGTGACCAGC GAGTACCTCG CCAACGCCGA CGACATCCAG
ATCAAGATGG CCCAGGGGGC GAAGCCCGGG GAGGGGGGGC AGCTTCCTGG CCACAAGGTC
TACCCGTGGA TCGCGAAGAC GCGGCACTCG ACGCCCGGTG TCGGGCTCAT CTCCCCGCCG
CCGCACCATG ACATCTACTC GATCGAGGAC CTCGCCCAGC TCATCCACGA CCTGAAGAAC
GCCAATCCCA AGGCCCGGGT GCACGTCAAG CTGGTCGCCG AGGTCGGCGT CGGCACGGTC
GCCGCCGGGG TCTCCAAGGC GCACGCCGAT GTGGTGCTGA TCTCCGGGCA CGACGGCGGG
ACGGGCGCCT CGCCGCTGAC CTCGCTGAAG CACGCGGGTG CCCCCTGGGA GCTGGGGCTG
GCCGAGACCC AGCAGACGCT GCTGCTCAAC GGCCTGCGCG ACCGCATCGT CGTGCAGGTC
GACGGGCAGC TGAAGACCGG CCGCGACGTC ATCGTCGGGG CGCTGCTGGG GGCCGAGGAG
TTCGGTTTCG CCACCGCCCC GCTGGTGGTT GCCGGCTGCG TGATGATGCG CGTCTGCCAT
CTCGACACCT GTCCGGTCGG TGTGGCGACC CAGAACCCGG AACTGCGCAG GCGGTTCACC
GGCAGGCCCG AGTTCGTCGA GGCCTTCTTC ACCTTCATCG CCGAGGAGGT GCGCACCTAC
CTCGCCGCGC TGGGCTTCCG CAGCCTGCAG GAGGCGGTCG GCCGGGTCGA CCTGCTCGAC
GCCCGCGCCG CCGTCGACCA CTGGAAGGCC TCCGGCCTCG ACATCACCCC GTTGCTGCAC
ACCCCGGAGC GGCCCTTCGG CGGCTCGCTG AACTGCACGT CCAGCCAGGA CCACGGGTTG
GACAAGGCGC TGGACAACTC GCTGATCCAG CTGTGCGAGG GAGCGCTCGA CGACGGCCGG
CCGGTCTGGC TGGAGATGCC GATCCGCAAC GTCAACCGGA CCGTGGGCAC CATGCTCGGC
TACGAGGTGA CGAAGCGCTT CGGCGCGGCG GGGCTGCCCG ACGACACGAT CCAGCTGCGG
TTCACCGGCT CCGCGGGGCA GAGCTTCGGC GCCTTCGCGC CCCGCGGCAT GACACTGACC
CTCGAGGGCG ACGCGAATGA CTACGCCGGC AAGGGCCTGT CCGGCGGCAA GATCTTCGTC
TTCCCGCCGA AGGAGTCCCC GCTGCGGGCC GAGGAGAACA TCGTCGCCGG TAACGTCCTG
CTCTACGGGG CGACGGGCGG CGAGGCGTTC TTCCGCGGAA TCGTCGGCGA GCGGTTCTGC
GTGCGCAACT CCGGGGCGAC CGCGGTGGTC GAGGGGGTCG GCGACCACGG CTGCGAGTAC
ATGACCGGCG GCACCGTGCT GGTGCTCGGG GCCATCGGGC GCAACTTCGC CGCGGGCATG
AGCGGCGGCG TGGCCTACCT GTACGACCCG GTCGAGGCGC GGATCAACAC CGAGATGGTG
GACGTCGAGG CGCTGGACGA CGCCGACGAG ACGATCGTGC GGGACCTGCT CGTCCGGCAC
CGCCGGGAGA CCGGTTCGAC GGTGGCCGCC CGGCTTTACA CCGACTGGGA CACCGTGCGC
GGGTCGTTCC GTAAGGTGAT GCCACGGGAC TACAAGCGGG TGCTGACCGC CATCCGGCAG
GCGCAGGAGC AGGGGCTCGT CGCCGACGAG GTCATCATGG CGGCGGCTCG TGGCTGA
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| Protein sequence | MPSAQGLYDP TFEHDACGVG FVVDVHGRRS HELVEQGLTV LRNLDHRGAS GSDPDTGDGA
GILVQVPDLF LRDVVDFTLP APGRYAVGIA FLPQVSGERD EAVRTISRIV RQEGLRVLGW
REVPVVSHIV GHAAHEVEPR MRQLFLALPG SLPAAGPVEG GAGNGFDQAD LERRAFCARK
RIRRETGVYL ASLSSRTLVY KGMLTTHQLS AYFPDLDDPR FTSAIALVHS RFSTNTFPSW
PLAHPYRFVA HNGEINTVRG NRNWMRAREA LLASDLIPGD LSRLFPVCAD GASDSASFDE
VLELLYLGGR SLPHAVLMMI PEAWENHTEM DPALRAFYQF HSTLMEPWDG PASIAFTDGT
VIGAVLDRNG LRPSRYWVTD DGLVVMASEV GVLDIPPHKV VQKGRLQPGR MFLVDTAEGR
IVSDEEIKSE LANAAPYAEW LHAGLIELDD LPEREQLLYG HSSVLRRQQV FGYTLEELRV
LVAPMARTGA EPIGSMGTDT PVAVLSSRPR LLFDYFTQLF AQVTNPPLDA IREELVTSLG
RVLGPEGNLL APSPASCRMV HLPYPVISSS QLSKIIGIND DGDMPGFASV TVRGLYDVDG
GGAALAARLA EICAGVSEAI ADGARIVVLS DRDSDTRKAP IPSLLLTAAV HHHLIRERTR
TKVGLIVECG DAREVHHIAL LTGYGAAAVN PYLAFESIDS LIAEGEIVGV SREQAEKNMI
KALGKGVLKV MSKMGISTVA SYTGAQVFEA IGLSQELIDA YFAGTPSRLD GIGLDVIAAE
VAARHRRAYP PIASEHAHRT LEVGGEYQWR REGELHLFNP ETVFLLQHAT RTRQYETFQK
YTARVDGLSR ENATLRGLFE LRTGVRTPVP IEEVEPASEI VKRFATGAMS YGSISAEAHE
TLAIAMNRLG GKSNTGEGGE DAERFTPDAN GDLRRSAVKQ VASGRFGVTS EYLANADDIQ
IKMAQGAKPG EGGQLPGHKV YPWIAKTRHS TPGVGLISPP PHHDIYSIED LAQLIHDLKN
ANPKARVHVK LVAEVGVGTV AAGVSKAHAD VVLISGHDGG TGASPLTSLK HAGAPWELGL
AETQQTLLLN GLRDRIVVQV DGQLKTGRDV IVGALLGAEE FGFATAPLVV AGCVMMRVCH
LDTCPVGVAT QNPELRRRFT GRPEFVEAFF TFIAEEVRTY LAALGFRSLQ EAVGRVDLLD
ARAAVDHWKA SGLDITPLLH TPERPFGGSL NCTSSQDHGL DKALDNSLIQ LCEGALDDGR
PVWLEMPIRN VNRTVGTMLG YEVTKRFGAA GLPDDTIQLR FTGSAGQSFG AFAPRGMTLT
LEGDANDYAG KGLSGGKIFV FPPKESPLRA EENIVAGNVL LYGATGGEAF FRGIVGERFC
VRNSGATAVV EGVGDHGCEY MTGGTVLVLG AIGRNFAAGM SGGVAYLYDP VEARINTEMV
DVEALDDADE TIVRDLLVRH RRETGSTVAA RLYTDWDTVR GSFRKVMPRD YKRVLTAIRQ
AQEQGLVADE VIMAAARG
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