| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3006 |
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| Symbol | |
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| ID | 3905503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3565431 |
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| End bp | 3567413 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637880326 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_482092 |
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| Protein GI | 86741692 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.84067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.316965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTC CATCGGCCGG GTTGTCGCTG GCCGCAGACT TTCCGGAGGC GACGCGCGCC
GATTGGCAGA CGCTCGTCCT GCAGGTGCTG CGCAAGTCCG GCGTGGCGAC CGAGGCGACT
ACTCCCGGCG AGGTCGAGGA GCTGTTGGCC ACGCGGACCT ACGACGGTCT GCGGATCCGT
CCGCTCTACA CCGCCGAGAA CACCCCCGCC GGCGGGGTGG GCCTGCCGGG GTTCGCCCCG
TTCGTGCGGG GTGGGCGGGC GCAGGGCGCG GGCACCGGCG GGTGGGATGT CCGCGCGCTG
CATGACAACC CCGATGCCAC GCTCGCCGCC GAAGCGGTCC TCGCCGATCT GGAGAACGGC
GCCACCTCGC TCTGGCTGCG GCTGGGGCCC GCCGGTCTGC CGATCGGCGG GCTCGGCGCG
GTGCTGCGCG AGGTCTACCT CGACCTCGCG CCGATCGTGC TGGACGCGGG GGAGCTCACC
GCCGCGGCCG CCGAGGAGTT CTTCGGCCTC GTCGCCGCCC GCGGCCTGCC CGGTTCGCAG
CTCACGGGCA GCCTCGGCGC CGACCCGATC GGTCTGGCCG CGCGGACCGG CCTGCCGGCC
GGCGGCCCGG TGGGCCTCGC CGAGGCGGTG TCGCTCGCCG GCCGGTGCGT GCGGGAGTTC
CCCGGGATCC GCGCCCTCGT CGTCGACGCC CAGCCGTACC ACCGCGCGGG TGGCAGTGAC
GCCGAGGAGC TTGGGGCGTC ACTGGCCACC GGCGTCACCT ACCTGCGGGA GCTCACCGAG
GCCGGCCTGA GCCTTGCCGA GGCGCTCGCC CAGATCGAGT TTCGCTACGC GGTCACCGCC
GATCAGTTCT CCTCGATCGC GAAGCTGCGG GCCGCCCGCC GGATGTGGTC ACGGGTCGCC
GAGATGTGCG GCGCTGAGCC GGCCGACCGG GCCCAGCGTC AGCACGCGGT CACCTCGGCG
GCGATGATGA CCCGCCGGGA TCCCTGGGTG AACATGCTGC GCACGACGCT GGCCTGCTTC
GGCGCCGGTG TCGGCGGCGC CGACGCGGTC ACTGTCCTGC CGTTCGACAC GCGCCTCGGC
CGGTCCGACG ACTTCTCCCG CCGGATCGCC CGCAACACCC AGGCCCTCCT GCAGGAGGAG
TCGAGCCTGA TCCGGGTGAC CGACCCGGCC GGTGGCTCCT GGTACGTCGA GTCGCTCACC
GCCGGGCTCG CCGAGGCGGC CTGGGCCTGG TTCACCGAGA TCGAGCGGGC CGGCGGGATC
GTCGCCGGCC TGCGGTCCGG GCTCGTCGCC GAGCGGATCG CGGCCACCTG GGCGACGCGC
TCCGACGCGA TCGCCCACCG GCGGGACCCG ATCACCGGGG TGAGCGAGTT CCCGAACCTG
GGCGAGAAGC TCCCCGAGCG GCCCGCCGTG CCCGCCGCGA GCCCCGTGCC CGCCGCGAGC
CCCGTGCCCG CCGCGAGCCC CGTGCCCGCC GCGAGCCCCG CCGGCGCCGG CGGGGAGGCC
GCCACGGCGG TGGGCGCCGG GCTGCCGGAG GTCACCTACG ACCTCACCTT CGAGGAGCTG
CGCGCCCGTT CCGACGCGCA CTTGGCGGCG ACGGGCGGCC GGCCTGTGGT CTTCCTGGCC
ACCCTGGGCA GCGCGGCGGC CTCGACCGCG CGCGCCACCT TCGCCGCCAA CCTGTTCCAG
GCGGGCGGGT TCGAGACTCC GACGTCCGGC CCGGGCACGG ACCCGGCGTC GATCGCGGCG
GCGTTCAGCG CCTCCGGGGC CACCGTGGCC TGTCTGTGCT CGGCCGACAA GGTATACGCC
GAGCACGCCG GGCCGGTCGC CGAGGCGCTG CGGGCCGCCG GGGCGAGCCG GGTGTGGCTC
GCGGGCCAGG CCGGTGCGCG CGCGCGGACC GACGCCGCCG CGGGCATCGG CGGGTACGTG
TTCACTGGAT GCGACGCCGT CGCCGTGCTG CGGGCGGCGC TCGCCGAGGT TGGGGTGGCC
TGA
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| Protein sequence | MSVPSAGLSL AADFPEATRA DWQTLVLQVL RKSGVATEAT TPGEVEELLA TRTYDGLRIR
PLYTAENTPA GGVGLPGFAP FVRGGRAQGA GTGGWDVRAL HDNPDATLAA EAVLADLENG
ATSLWLRLGP AGLPIGGLGA VLREVYLDLA PIVLDAGELT AAAAEEFFGL VAARGLPGSQ
LTGSLGADPI GLAARTGLPA GGPVGLAEAV SLAGRCVREF PGIRALVVDA QPYHRAGGSD
AEELGASLAT GVTYLRELTE AGLSLAEALA QIEFRYAVTA DQFSSIAKLR AARRMWSRVA
EMCGAEPADR AQRQHAVTSA AMMTRRDPWV NMLRTTLACF GAGVGGADAV TVLPFDTRLG
RSDDFSRRIA RNTQALLQEE SSLIRVTDPA GGSWYVESLT AGLAEAAWAW FTEIERAGGI
VAGLRSGLVA ERIAATWATR SDAIAHRRDP ITGVSEFPNL GEKLPERPAV PAASPVPAAS
PVPAASPVPA ASPAGAGGEA ATAVGAGLPE VTYDLTFEEL RARSDAHLAA TGGRPVVFLA
TLGSAAASTA RATFAANLFQ AGGFETPTSG PGTDPASIAA AFSASGATVA CLCSADKVYA
EHAGPVAEAL RAAGASRVWL AGQAGARART DAAAGIGGYV FTGCDAVAVL RAALAEVGVA
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