| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3004 |
|---|
| Symbol | |
|---|
| ID | 3905501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3562045 |
|---|
| End bp | 3563139 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637880324 |
|---|
| Product | arginine/ornithine transport system ATPase |
|---|
| Protein accession | YP_482090 |
|---|
| Protein GI | 86741690 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family |
|---|
| TIGRFAM ID | [TIGR00750] LAO/AO transport system ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.487769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.192606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCCG GCATGGTGAC CCGACGACCG ATCGATCCGG GTGAGTACGC CGACGGGGTG
CTGGCCTCGT CGCGGACCTG GATCGCGCGG GCCATCACCC TCGTCGAGTC CACCAGGCCC
GACCACCAGG AGCTCGCGCA GCAGCTGCTG GTGACGTTGC TGCCGCACGC GGGCAAGGCC
CGTCGGATCG GCATCACCGG GGTGCCCGGG GTGGGCAAGT CGACGTTCAT CGACGCGCTG
GGCACCATGC TCACCGGGAA GGGAAACCAG GTGGCGGTGC TCGCCGTCGA CCCCTCCTCG
ACGCGTACCG GCGGCAGCAT CCTGGGGGAC AAGACCCGGA TGGCGGCGCT GTCCACCGAT
CCGGCGGCGT TCATCCGGCC CTCGCCCACC GCGGGGACGC TCGGTGGCGT CGCCAAGGCG
ACCCGCGAGG CGATGGTCGT CATGGAGGCG GCGGGCTACG ACGTTGTCCT GGTCGAGACG
GTCGGCGTCG GCCAGTCGGA GACGACCGTC GCCGACATGG TCGACACCTT CCTGTTCCTG
ACCCTGGCCC GCACGGGGGA TCAGCTCCAG GGCATCAAGA AGGGGGTGCT GGAGCTCGCC
GACGTCATCG CGGTGAACAA GGCCGACGGG CCGCACGAGC TCGACGCCCG CCGTGCCGCC
CGGGAACTCG CCGGCGCGCT GCGGCTGCTG CAGGGCCCCG CCGGTCTCCG GGACTGGAAC
ACCCCGGTGC TGACGTGCAG CGCGGTGGAG CGGACGGGGC TGGACACTGT CTGGGCGCAG
ATCGTCAAGC ATCAGGACAC CCTCGACGCC TCCGGCGAAC TCGCCGCCCG CCGCCGCCGC
CAGCAGGTCG ACTGGATGTG GGCGATGGTC CACGATCGGC TGCTCGCGGG CCTGCGGGCC
GATCCGGGGG TCCGCGAGAT CACTCCGGAC CTTGAACGGC GGGTCCGCGA CGGCACCCTC
CCCCCGAGCC TGGCCGCCGA CGCCATCCTC GCCGCGCATG ATGGCCTGGC CGCCCACGAG
GGCCGGGCCG CGGCACCCTC CGACGCCGCG GAAAGCCGCG ACGGAAAGCC ACGACGGAAA
AGTGTGGAGG GTTAG
|
|---|
| Protein sequence | MVSGMVTRRP IDPGEYADGV LASSRTWIAR AITLVESTRP DHQELAQQLL VTLLPHAGKA
RRIGITGVPG VGKSTFIDAL GTMLTGKGNQ VAVLAVDPSS TRTGGSILGD KTRMAALSTD
PAAFIRPSPT AGTLGGVAKA TREAMVVMEA AGYDVVLVET VGVGQSETTV ADMVDTFLFL
TLARTGDQLQ GIKKGVLELA DVIAVNKADG PHELDARRAA RELAGALRLL QGPAGLRDWN
TPVLTCSAVE RTGLDTVWAQ IVKHQDTLDA SGELAARRRR QQVDWMWAMV HDRLLAGLRA
DPGVREITPD LERRVRDGTL PPSLAADAIL AAHDGLAAHE GRAAAPSDAA ESRDGKPRRK
SVEG
|
|---|
| |