| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2987 |
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| Symbol | |
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| ID | 3905483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3538048 |
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| End bp | 3538896 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880307 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_482073 |
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| Protein GI | 86741673 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.232638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCCA CGATGCTCGA CGACTACCTA CCTGAGGCGA GTCCGAACGC ATCCTCCGTG
ACCGGGGCCG GTCTCCTGTT CGCGGTCCTG GGGCCGCTGG AGGTGCGGCG ATCCTCGGGC
GAGCAGGTCC GCATCGACCA GCGCAAGAAG CGCATACTGC TGCTGACCCT GCTGCTGCAC
GCCGGCCAGT GGGTGAGTGT GGACGGGATG CGGCTCGCGC TCTGGCAGGA TGCCCCGCCG
CGCTCCGCCG GGGGCAACAT CAAGACTTAT CTCTCGGAGC TGCGGCACAC CCTCCGGCCG
CCCCTGGACA CGTCCGGAGC CGGGGGGAAC GGCCCCGGGC GCATCGAGAG CCGGCCGGGG
GAGTACCGCC TGGTCGTCGC GTCCGGTGAG ATCGACGCTA AGCGGTTCGA ATCGGCCGCC
GAGCAGGGCC GCGCCGCCGT GCGCGCCGGC TCGCCGGAAC GCGCCGCCGG GTTTTTCGAA
GGCGCCCTCG CGCTGTGGCG GGGGGACGCC TTCGACGAGC TCCCGGCGGA GATCGCGGGC
GCGGAGGTCC TCCGGCTGGA GGAGGCTCGC TGGGCGGTGT GCGAGGACCT GATCGACGCC
CGCCTGGCCC TCGGCGAGTA CGACCGGGTG CTGCCGACCC TGCGGGCGCT CACGGTCGAA
CATCCGACCC GGGAACGTCT CTGGGCCCAG CTGATCCTTG CGTTGGAACA CACCGGCCGG
CGGGCCGAGG CACTGGCCGA GTACCAGACG GTCTACCGGC GGCTGGTGAC CGAACTCGGG
ATCGAGCCCG GTGTCGAACT GCGGCGTGCC CATCAGCATG TACTGAATCC GGACTCGTGG
GTCACCTGA
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| Protein sequence | MRATMLDDYL PEASPNASSV TGAGLLFAVL GPLEVRRSSG EQVRIDQRKK RILLLTLLLH
AGQWVSVDGM RLALWQDAPP RSAGGNIKTY LSELRHTLRP PLDTSGAGGN GPGRIESRPG
EYRLVVASGE IDAKRFESAA EQGRAAVRAG SPERAAGFFE GALALWRGDA FDELPAEIAG
AEVLRLEEAR WAVCEDLIDA RLALGEYDRV LPTLRALTVE HPTRERLWAQ LILALEHTGR
RAEALAEYQT VYRRLVTELG IEPGVELRRA HQHVLNPDSW VT
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