| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2984 |
|---|
| Symbol | |
|---|
| ID | 3905480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3535024 |
|---|
| End bp | 3535542 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637880304 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482070 |
|---|
| Protein GI | 86741670 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.013961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.239102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTCG AGCGGCCGGA GGCGAAACCG TCCCTCGCTC GTCGGCTCGG CGCGCTGGTC
GCCGTGGGGA TCGCGCGGGT GCTCGCGACC CAGTCGCCGG CCCGCATCTG CCGGGTGCTC
ACGGGGGTGG GCGCGGGCGC CCGCCCGGCC GACTATGGCA CCGCGCTCGC CGCCCGGCAG
GCGGTGACAG CCGTGAGCCT CACCTGCCGC GGCGCGCGGG GCTGTGTTCC CCGCTCGATA
GCGACCGCCC TGCTGTGCCG GTTGACCGGA ACGTTCCCGA CGTGGCGTGT GGGGGTGCGC
ACCATCGCGC CGTTCGCCGC GCACGCGTGG GTCGAGGCGG ACGGAGTGAT CGTCGGGGAG
TCGATGCCGG CAGGCTACCT GCGGCCGCTG CTCAGCGTCG GTCCGGGAAC GGTAACCGGG
CCGCGTCGCG TGGGCTGGCT CCGTCGCGTG GGCGGGCTCC GTGGGAGTGG CGGGCTTCGG
GGAAGGGGCG TGCCTCGTGA CGAGGGCGTA CGTCGTTGA
|
|---|
| Protein sequence | MVVERPEAKP SLARRLGALV AVGIARVLAT QSPARICRVL TGVGAGARPA DYGTALAARQ
AVTAVSLTCR GARGCVPRSI ATALLCRLTG TFPTWRVGVR TIAPFAAHAW VEADGVIVGE
SMPAGYLRPL LSVGPGTVTG PRRVGWLRRV GGLRGSGGLR GRGVPRDEGV RR
|
|---|
| |