| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2978 |
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| Symbol | |
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| ID | 3905474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3521117 |
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| End bp | 3521734 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880298 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_482064 |
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| Protein GI | 86741664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000961865 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGATC CGAAGCCCGA CCGTCTCGTT CCTTCGCGCG GGTGCTTGTC GGCCGCGGTC
GCCCTGACGA TCGACGACGG TCCGCATCCG GTGTGGACGC CGCGGATGCT CGACGTCTTG
CGCCGCAACC GGGTCCAGGC AACGTTCTGC CTGGTCGGGG CCCAGGCACA CGCGCACCGG
GACCTGGTGG GCCGCATCAT CGCCGAAGGG CACTCCGTCT GTAACCACGC GATGACCCAT
CCCCAGCCGT TCAGTCATCG CACACCGGCG CAGATCCGGG CCGAGATGGT CCGCGCCCAG
TCGGTCATCG TCGACGCGGG TGGGAAACCG CCCCGGCTCT TCCGCGCGCC GGGTGGTGAC
TGGTCGCCGG CCGTGCTCGC CGCGGCCGCG AACCTCGGCA TGACCGCGAT CGGCTGGGAC
GTGGACCCCC GGGACTGGGC CCGACCGGGC ACGCCGCGGA TCGTGCGCTC GCTGACCGCG
GCGCGGCCGC GTCCCGGGCC GCGACCGGCG GTGATGGTGA CCTGGTGTTT CGTGGATCGG
GGTTCGCCGT CGGTGAGGGT TCATCGGCAC CGGGCGGGGC ACGTTCCTGG CGTTGGCCAC
GGAAGGAGCT CCCGATGA
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| Protein sequence | MLDPKPDRLV PSRGCLSAAV ALTIDDGPHP VWTPRMLDVL RRNRVQATFC LVGAQAHAHR
DLVGRIIAEG HSVCNHAMTH PQPFSHRTPA QIRAEMVRAQ SVIVDAGGKP PRLFRAPGGD
WSPAVLAAAA NLGMTAIGWD VDPRDWARPG TPRIVRSLTA ARPRPGPRPA VMVTWCFVDR
GSPSVRVHRH RAGHVPGVGH GRSSR
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