| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2976 |
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| Symbol | |
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| ID | 3905472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3519275 |
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| End bp | 3520279 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637880296 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_482062 |
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| Protein GI | 86741662 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0120131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCGG TTCGGCTGGG TTCGCTTCGG TTCACGACCG TCATCGCCGC CGCGTCCGTG
GCCGCCCTCG CAGCGGCGCT CACCACGGCC TGCCAGGCGT TTCCCGCCGG CAGGGCAGCG
TCGGCGACGC CGTCTACGGG AGCCCGGGCC GACCAGGAGA TCACGATCGC CGCGACTCCC
GTCCCGCCGC ACCCGTCCGG GGCGGCGCGC ACGGAGCTCA CCGCAGGGTC GTTCGCCCAG
CCGACCACGC ACCCGACCGC GGAGCCGGTC GCGGAGCCGG CGAGGACATC GTCGACGGCG
TCGTCCGGCC TGTCCACGGC CACGGCCACG ACCACGACCC CGCTACCGTC GCGGACCGAC
GAACCGTCCG CGGGCCTGCC GGACGCTACC CGCCTGCCGG TTCCGGTGCA GGCACCCCTC
GTCGCACCGG ACACGAGCGT CGCACCGGAC ACGAGCGTCG CACCGGGCAC GAGCGTCGCA
CCGGGCACGA GCGTCGCGCT GGGCACGAGC ACGTCCGCGC CGGCTCCGAG GCGGACGCCG
CCCGTCGCCC CGCCCCGGAC CGGCACCGAG GCCGCCGAGG TGGTCCGGTT GACCAACATC
GAGCGGGCCC GAGCGGGCTG CGGCGCGCTG ACGGTCGACG CCCGGCTGGC AGCCGCGGCG
CAGGCGCACA GCACCGACAT GGCGGCGAAC GGCTACTTCG GCTACACCGG TAGGGACGGT
CGCGGCCTCG ACAAGCGGCT GGCCGCCCGC GGATACACCG CCGATCTCGT CGGGGAGAAC
ATCGCCGCCG GATCGCTCAC CGCGGCTCGG ACCGTGCAGA TGTGGATGGA CAGCGCCGAT
CGGCGGGCGA CCATCCTCAC CTGTGCCTTC ACCGCCATCG GCGTGGGCTA CGCCACCGGC
GGCGCGTACG GCACCTACTG GACGCAGGAC TTCGCCGGCG CCGACCCACG AAACCACTCC
GGGCCGAGGC ACCCGGCCGG CCCTGAGACG CACGGCCGGC CCTGA
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| Protein sequence | MGSVRLGSLR FTTVIAAASV AALAAALTTA CQAFPAGRAA SATPSTGARA DQEITIAATP
VPPHPSGAAR TELTAGSFAQ PTTHPTAEPV AEPARTSSTA SSGLSTATAT TTTPLPSRTD
EPSAGLPDAT RLPVPVQAPL VAPDTSVAPD TSVAPGTSVA PGTSVALGTS TSAPAPRRTP
PVAPPRTGTE AAEVVRLTNI ERARAGCGAL TVDARLAAAA QAHSTDMAAN GYFGYTGRDG
RGLDKRLAAR GYTADLVGEN IAAGSLTAAR TVQMWMDSAD RRATILTCAF TAIGVGYATG
GAYGTYWTQD FAGADPRNHS GPRHPAGPET HGRP
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