Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2975 |
Symbol | |
ID | 3905471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3518332 |
End bp | 3519198 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637880295 |
Product | allophanate hydrolase |
Protein accession | YP_482061 |
Protein GI | 86741661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0524316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA TCGTCGCGCC AGGTCCGTTC GCCACGGTCC AGGATCTCGG CCGGCCCGGG CTCGCGCACC TGGGCATCAC CCGGTCCGGC GCGGCCGACC GTCGCAGTCT GCTGCTGGCG AACCGGCTCG TCGGCAACGT CGCGACCGCG GCGGCGGTCG AGCTCACCTA CGGCGGCCTC ACCGCACGGT TCACGGATCC GGCGCTGATC GCGCTGACCG GCGCGCCGTG CCCGCTGGAA CTCGCCGGTC GCCAGATCAG CATGTACTCC CCGGTGGACG TGCCCGCCGG CGCGCTGTTG CGGATCGGGG CACCCGACCG GGGCCTGCGC ACCTACCTCG GAATTCGCGG GGGGATCGGT GTCCCCCCGG TGCTCGGCTC ACGATCGAGT GACACCCTCT CCGGGATCGG TCCGCAACCG CTGAGCACCG GTCGGCGGCT GCCGCGGGCG GCCGACAGCG CGGACCCGCC AACCGTCGAC CTCGCCCCGC TCGCCCAGTA CCCGGACGAA CCGACCCTGC GGGTCCTCGC CGGCCCCCGC GACGACTGGT TCACCGCGGA CGCGCTGCCC ACGCTGTTCT CCGCGTCCTA TGAGGTGACG GCCCAGAGCG ACCGGGTCGG CGTACGGCTC GTCGGGCCGG CGCCGCGCCG CCGGATCACC GCGGAGCTGC CCTCGGAGGC CGTCGTCACC GGGGGGATCC AGATCCCCCC GGACGGGCGG CCGGTCCTCT TCCTCGTCGA CCATCCGGTC ACCGGGGGTT ATCCCATGCT GGGCGTCGTC GCGTCCGAGG ATCTGCACCT GGCCGCGCAA TGCCGGCCCG GCCAGCGCAT CCGGTTCCGG CCCTACCACA GCTGGACCAC ACGATGA
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Protein sequence | MIEIVAPGPF ATVQDLGRPG LAHLGITRSG AADRRSLLLA NRLVGNVATA AAVELTYGGL TARFTDPALI ALTGAPCPLE LAGRQISMYS PVDVPAGALL RIGAPDRGLR TYLGIRGGIG VPPVLGSRSS DTLSGIGPQP LSTGRRLPRA ADSADPPTVD LAPLAQYPDE PTLRVLAGPR DDWFTADALP TLFSASYEVT AQSDRVGVRL VGPAPRRRIT AELPSEAVVT GGIQIPPDGR PVLFLVDHPV TGGYPMLGVV ASEDLHLAAQ CRPGQRIRFR PYHSWTTR
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