Gene Francci3_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2975 
Symbol 
ID3905471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3518332 
End bp3519198 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content74% 
IMG OID637880295 
Productallophanate hydrolase 
Protein accessionYP_482061 
Protein GI86741661 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0524316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA TCGTCGCGCC AGGTCCGTTC GCCACGGTCC AGGATCTCGG CCGGCCCGGG 
CTCGCGCACC TGGGCATCAC CCGGTCCGGC GCGGCCGACC GTCGCAGTCT GCTGCTGGCG
AACCGGCTCG TCGGCAACGT CGCGACCGCG GCGGCGGTCG AGCTCACCTA CGGCGGCCTC
ACCGCACGGT TCACGGATCC GGCGCTGATC GCGCTGACCG GCGCGCCGTG CCCGCTGGAA
CTCGCCGGTC GCCAGATCAG CATGTACTCC CCGGTGGACG TGCCCGCCGG CGCGCTGTTG
CGGATCGGGG CACCCGACCG GGGCCTGCGC ACCTACCTCG GAATTCGCGG GGGGATCGGT
GTCCCCCCGG TGCTCGGCTC ACGATCGAGT GACACCCTCT CCGGGATCGG TCCGCAACCG
CTGAGCACCG GTCGGCGGCT GCCGCGGGCG GCCGACAGCG CGGACCCGCC AACCGTCGAC
CTCGCCCCGC TCGCCCAGTA CCCGGACGAA CCGACCCTGC GGGTCCTCGC CGGCCCCCGC
GACGACTGGT TCACCGCGGA CGCGCTGCCC ACGCTGTTCT CCGCGTCCTA TGAGGTGACG
GCCCAGAGCG ACCGGGTCGG CGTACGGCTC GTCGGGCCGG CGCCGCGCCG CCGGATCACC
GCGGAGCTGC CCTCGGAGGC CGTCGTCACC GGGGGGATCC AGATCCCCCC GGACGGGCGG
CCGGTCCTCT TCCTCGTCGA CCATCCGGTC ACCGGGGGTT ATCCCATGCT GGGCGTCGTC
GCGTCCGAGG ATCTGCACCT GGCCGCGCAA TGCCGGCCCG GCCAGCGCAT CCGGTTCCGG
CCCTACCACA GCTGGACCAC ACGATGA
 
Protein sequence
MIEIVAPGPF ATVQDLGRPG LAHLGITRSG AADRRSLLLA NRLVGNVATA AAVELTYGGL 
TARFTDPALI ALTGAPCPLE LAGRQISMYS PVDVPAGALL RIGAPDRGLR TYLGIRGGIG
VPPVLGSRSS DTLSGIGPQP LSTGRRLPRA ADSADPPTVD LAPLAQYPDE PTLRVLAGPR
DDWFTADALP TLFSASYEVT AQSDRVGVRL VGPAPRRRIT AELPSEAVVT GGIQIPPDGR
PVLFLVDHPV TGGYPMLGVV ASEDLHLAAQ CRPGQRIRFR PYHSWTTR