| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2963 |
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| Symbol | |
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| ID | 3903778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3510249 |
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| End bp | 3511448 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880284 |
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| Product | putative transposase, IS891/IS1136/IS1341 |
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| Protein accession | YP_482050 |
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| Protein GI | 86741650 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.268101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.616422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGACGGT CGTACAAGTT CCTGCTCCGC CCGACCGCGC ACCAGCAGAT CGCGTTGACG
GCGATGCTCG ACGACCACCG GGCGCTGTAC AACGCCGCGC TTCAGGAGCG GCGCGATGCC
TACCGGCATC CGAGCAAGAC GACGGTCCGC TACGGGGGCC AGTCGGCCCA GCTCAAGGAC
ATTCGGGGGT TTGACGCGGA TCAGGCCCGC TGGTCGTTCT CCTCTCAGCA GGCCACCCTG
CGTCGCCTCA ATCTCGCATT CGCCGCGTTC TTCCGCCGGG TCAAGGCGGG CGAGACGCCC
GGCTACCCGC GGTTCAAGGG CGCCGGCTGG TTCGACACGG TGACGTGGCC CGCCAACGGT
GACGGGTGCC TCTGGGACTC GCAGCCCGAG AACCCGAAGA CGATGTTCGT CCGCCTTCAG
GGCGTCGGCC ACGTCAAGGT CCACCAGCAC CGGCCAGTGG CTGGCCGGGT CAAGACGCTG
TCCGTCAGGC GGGAGGGTGC CCGCTGGTAC CTCGTGCTGT CCTGCGACGA CGTGCCCGCC
GAGCCGCTGG AACCAACGGG CGCCGTCGTC GGCGTGGACT TGGGTGTCGC CTCGCTGGCC
AGCACGTCGA ACGGCGAGCA CTACGGCAAC CCGCGTTTCC TCGAACGGGC CGCCGGGCGC
CTCGCCAACG CGCAGCGCGA CCTTGCCCGT AAGAAGCGCG GCTCGAAGCG GCGCCGCAAG
GCGGCTACTC GGGTCGCGAA CCAGTCCCGG GCCGTGGCCC GGCAGCGCGT CGACCTCGCG
AACAAGACCG CGCGCGAACT GGTCGCCGAC CACGACCTGA TCGCTGTCGA GAAGCTGAAC
GTCAAGGGCA TGGTCCGCCG GGCCAAGCCG AAGCCCGACC CGGACCAGCC GGGGGCGTTC
CTGCCGAACG GGCAGGCCGC CAAGTCCGGG CTGAACAGGT CGATTCTCGA CGCCGGGTGG
GGGGTGTTCC TCAACGCACT GCGTGCCAAG GCTGAAAGCG CCGGGCGGGT CGTCGTCGAG
GTCAACCCCC GCCACACCTC CCAGCGATGC GCCGAATGTG GCCATGTCGC CCCGGAGAAC
CGGCCCAGTC AGGCCACGTT CCGCTGTGTG GAGTGCGGCC ACGCCGCGCA CGCAGACGTG
AACGCGGCGA TCAACATACT CGGGGCGGGG CTCGCCCTTC AGGTGGCGCA AGCTTCCTGA
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| Protein sequence | MRRSYKFLLR PTAHQQIALT AMLDDHRALY NAALQERRDA YRHPSKTTVR YGGQSAQLKD
IRGFDADQAR WSFSSQQATL RRLNLAFAAF FRRVKAGETP GYPRFKGAGW FDTVTWPANG
DGCLWDSQPE NPKTMFVRLQ GVGHVKVHQH RPVAGRVKTL SVRREGARWY LVLSCDDVPA
EPLEPTGAVV GVDLGVASLA STSNGEHYGN PRFLERAAGR LANAQRDLAR KKRGSKRRRK
AATRVANQSR AVARQRVDLA NKTARELVAD HDLIAVEKLN VKGMVRRAKP KPDPDQPGAF
LPNGQAAKSG LNRSILDAGW GVFLNALRAK AESAGRVVVE VNPRHTSQRC AECGHVAPEN
RPSQATFRCV ECGHAAHADV NAAINILGAG LALQVAQAS
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