| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2949 |
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| Symbol | |
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| ID | 3903764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3483997 |
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| End bp | 3486126 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637880270 |
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| Product | catalase |
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| Protein accession | YP_482036 |
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| Protein GI | 86741636 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase
[COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.962169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.093907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC CCGGGACGTC GCGCCTCCCC CGGGACGACG CGAAGCAGCA GCAACTCGAC
GCCGTCCGAA TCGGCGACGA CGGCGCCCGC ATGACCACCG ACCAGGGGAT CGGTGTCGAA
CACACCGACG ACTCGCTCGC GGCGGGGGAA CGCGGTCCGA CGCTGCTGGA GGACTTCCAC
TTCCGGGAGA AGCTCACTCG GTTCGATCAC GAGCGCATCC CCGAGCGGGT CGTCCACGCC
CGTGGTGCCG GTGCCTACGG GTACTTCGAG GCGTACGAGT CGCTCGCCGA CGTGACCCGG
GCGCACTTCC TGGGCGAGGA CGGCCGGCGT ACCCCGGTGT TCGTACGGTT CTCGACCGTC
GGCGGTTCCC GCGGTTCCGC GGACACGGTC CGGGACGTAC GCGGATTTGC CGTAAAATTT
TATACCGAGG AGGGTAACTT CGATCTCGTC GGTAACAACA TGCCGGTGTT CTTCATTCAG
GACGGCATCA AGTTCCCCGA CTTCGTCCAT GCGGTGAAGC CGGAGCCGCA CAACGAGATC
CCGCAGGCAT CCTCCGCGCA CAACACCCTG TGGGACTTCG TCAGTCTCGT CCCCGAGTCG
ATGCACATGA TGATGTGGCT GATGTCGGAC CGGGCGCTGC CGCGCAGCTA CCGGATGATG
CAGGGCTTCG GCGTGCACAC CTTCCGGTTC GTCGATGCCG CCGGGCAGGG GACCTTCGTC
AAGTTCCACT GGCGGCCGAA GCTCGGCACG CACTCCCTGG TCTGGGACGA GACACAGAAG
ATCGCGGGCA AGGACCCCGA CTTCAACCGG CGGGACCTGT GGGAGTCGAT CGAGAACGGT
ACGTTCCCGG AGTGGGAACT CGGCGTGCAG CTCGTGCCGG AATCCGACGA GCACGCGTTC
GACTTCGATC TTCTCGACGC GACGAAGATC ATCCCTGAGG AGCGGGTGCC GGTGCGGCCG
GTGGGACGGC TGGTGCTCAA CCGCAACCCC GGCAATTTCT TCGCCGAGAC CGAGCAGGTG
GCGTTCTGCG TACAGAACGT CGTCCCCGGC ATCGACTTCA CGAACGACCC GCTGCTGCAG
GCCCGGCTGT TCTCCTACCT GGACACCCAG CTGATCCGGC TCGGCGGCCC GAACTTCGCC
CAGCTGCCGG TCAACCGGCC GGTCGCGGCG GTGCACAACA ACTCCCGCGA CGGTTACGGG
CAGCATCGCA TCCAGCAGAG CCAGACGTCG TACTTCCCGA ACTCGATCAG CGGCGGTTGC
CCGGTGCTCT CCGATCCGGC GCACGGCGGG TACGTGCACT ACGCCGAGCG GGTCGACGGG
AACACGATCC GTAAGCGGAG CGAGAGCTTC AAGGACTTCT ACAGCCAGGC CACCCTGTTC
TGGAACAGCA TGTCCTCCTG GGAGCGGCGG CACATCGTCG ACGCGTTCAG CTTTGAGCTC
GGCAAGGTCG ACTACACCCA GATCAAGGAG CGTGTCCTGG GACATCTCGC CCAGGTGGAC
CACGAACTCG CGGCCGGGGT CGCCGAGAAC CTCGGACTGC CGGTGCCACC GGAGAGCACC
CCGAACCACG GACGATCCTC ACCCGCGCTG AGTCAGGCCG ACCAGCCCAG CGGGGTGGCC
ACCCGCAGGA TCGCGGTGCT CGCGGCGGAC GGCGTGGACG AGGTGGCATT GCGTTCGGCC
ACCGCCGCGC TGCGCGAACA GGGCGCGATC CTGGAGGTTC TCGCGCCGCA CGGAGGCATG
CTCGCCACGG TGTCCGGCGA CGCGTTGCCG GTGGACCGAA CGCTGGTGAC CATGTCCTCG
GTCCTCTACG ACGCGGTGTT CGTCGCCCCG GGCGAGCGCG GTGTCACCGC ACTGACACAC
AACGGCGAGG CCGTGCACTA CGTCGGCGAG GCGTACAAGC ACGCGAAGCC GATCGGCGCG
GTCGGCGCGG GGGTGTCGCT GCTCGAGATC GCATCCTTGC CGGGCGCGCG GGTCGCCGAC
CAGGGTGACG CGGTGGTGTC CGACCGGGGT ATCGTGACGG TCCGCGACCT TGCGGGGCCG
TCCGTGCTCG GCGACTTCGG TTCCGCGTTC GCCACGGCCG TGGCCGCCCA TCGGCACTTC
GACCGCGCGC TGGAGGCCGT CGCCGCGTAG
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| Protein sequence | MTDPGTSRLP RDDAKQQQLD AVRIGDDGAR MTTDQGIGVE HTDDSLAAGE RGPTLLEDFH
FREKLTRFDH ERIPERVVHA RGAGAYGYFE AYESLADVTR AHFLGEDGRR TPVFVRFSTV
GGSRGSADTV RDVRGFAVKF YTEEGNFDLV GNNMPVFFIQ DGIKFPDFVH AVKPEPHNEI
PQASSAHNTL WDFVSLVPES MHMMMWLMSD RALPRSYRMM QGFGVHTFRF VDAAGQGTFV
KFHWRPKLGT HSLVWDETQK IAGKDPDFNR RDLWESIENG TFPEWELGVQ LVPESDEHAF
DFDLLDATKI IPEERVPVRP VGRLVLNRNP GNFFAETEQV AFCVQNVVPG IDFTNDPLLQ
ARLFSYLDTQ LIRLGGPNFA QLPVNRPVAA VHNNSRDGYG QHRIQQSQTS YFPNSISGGC
PVLSDPAHGG YVHYAERVDG NTIRKRSESF KDFYSQATLF WNSMSSWERR HIVDAFSFEL
GKVDYTQIKE RVLGHLAQVD HELAAGVAEN LGLPVPPEST PNHGRSSPAL SQADQPSGVA
TRRIAVLAAD GVDEVALRSA TAALREQGAI LEVLAPHGGM LATVSGDALP VDRTLVTMSS
VLYDAVFVAP GERGVTALTH NGEAVHYVGE AYKHAKPIGA VGAGVSLLEI ASLPGARVAD
QGDAVVSDRG IVTVRDLAGP SVLGDFGSAF ATAVAAHRHF DRALEAVAA
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