| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2939 |
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| Symbol | |
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| ID | 3903754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3469006 |
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| End bp | 3471255 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880260 |
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| Product | TrkA-N |
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| Protein accession | YP_482026 |
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| Protein GI | 86741626 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0858519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGG GTTCTGGAAG TCCCGGCGTG ACCGGAGGCA ATGGCACCGT CAACGTTCAT
GGTGCCCTCG ATGGGCATGG CACCGTCAAC GTTCATGGTG CCCTCAGCGG GCATGGCGCT
GTCAACGGTC AGGGCGGCTC GGGAGGTTCG GGCGCCTTCG GTGGTCTCGG TGGTTCGGGT
GGTTCCGACT CGTCGGGTCA CGTCATTGTC TGCGGGCTGA GCAACCTGGG GCTCCGGCTG
GCCGAACAGC TCCGGGCGTC GGGTGTGACG GTGGTGGCCA TCGACGATCG GGTCGCCCCC
GCCACCCGGC GCAGGGTGGA GCGGTGGGGC GTGCGGGTCC TGGTGGAGAG TACCCGTGGC
GCCGGGGCGC TGCGCGAGGC CGGCATCGCC GCGGCGCTCG CGGTCGTGTC CTGTCACGAG
ACGGACCTCG ACAACCTGGG CACGGCGCTG GTCGCGGCCG AGACGGCCCC CGGTGTCCGG
CTCGTCGTGG CCATCAGTAA CCGCCAGCTC GGCGACCAGC TCGCGGACGC GCTCAGCCAG
GTCCGGGTGC TGAACCGGGC CGAGCTCGCG GGGCCGAGCT TCGTCGAGGC GTGCCTCCGC
TCGGACGTGA CGCACGCCTT CCCGATGGAC GAACGGTCCG ATGCCGAGGT CTTCGCGGTG
ATCGAGGAGT CGATCATAGG CCGGCATGCC TTCCGGGCCC GCTATGGCGA TCTGACCCCG
ATCTCGCTGC GCCGCGCGGG GGAGCGCCTC CCCGAGCTCT GCCCGCCCCG CGACGTCTCG
CTGCGCCCCG GCGACCGGCT GACGCTCCTC GGGCGGCTGT CGGAGTTCCA CGAGCGGGGC
ATGACGGTCG CGGGCCTGCA CGACGCGCGG CTGTTCGCCG CGCTGGCCGG CGGCTCGGCC
GAGCATGGCG ATCCCGGCGA TCCCCGCGAG CCCGGAGGGG TCCGGGGGGT CTGGCGGGCC
ACGGTGGCCA GGTTCCGGGA GATCGTCTCG ATGATCCGTG GGGAGCTCGA CCCCCCCTTC
CGGTTCGCAC TCGCCGCCGT AGTAACGATC ATGATGGTCG GTACGGTCGT GCTGTGGTTG
ACCTACGCCA ACCACAACGA GGCCGCACCC GCCGAGTTCG GCCCGCTGGA CGCGCTTTAC
CTCACGGTCG CGACGATGGC CACGGTCGGC TACGGCGACT TCAACTTCGG CGCCGCCGAC
GAGTGGCTAC AGGTGTTCGG CATCGGACTG ATGCTGCTCG GCGCCCTGTC GATCGCCGTC
GTCTATGCGT TCATTACCAA CATCATCATC AGCCGTCGGT TGGAGCGGGT GATGGGACGC
GGGCGGGCCG GGGCGGTGCG TGGCCACGTC ATTCTATGCA GGCTCGGCTC GGTGGGGGTC
GCCACGATGA ACGGCCTGGT GCGCGCGGGC CGGCATGTGG TGGTGATCGA GCGTGACGAG
AACAACCGGT ACCTGCCCGT CGCCCGTGAA CGTGGGGTGC CCGTGATCAT CGGGGACGCC
ACCGTCCGCT CGACGCTGCT GGAGGCCGGC CTCGCCCATG CCGCCACGAT CGCGGTGCTC
ACCAGCGACG ACGTCGCGAA CCTGGAGGCC GTGCTGTCGG CCCGGGAAGC GCACGAGGAG
TTGCGGGGGG CGTGGGCGGC CCGCCGCCCC GCCCGGCGGG CCGCCCGGCG GGGCGGCGGG
TGGTCCCGCG GCCGGATGCG GGAGTCCGAC CCGGACACGC ACCACCCCGA CCTGCGAGTA
GTGCTGCGGA TCTTCGACAC CACGATGGCC GACGAGGTCG AGCGGCGCTT CGGCATCCAT
ACGGCACGCA GCGCGTCCGC CCTGGCCACG CCGTATTTCG TCGGCGCGGC GCTCGGTTAC
GACGTCATCA GTACCTTCTA CGTGCAGCGC ACGCCGTTCC TGGTGGCCAG GATGACCATC
CACGCCGGCG GCGGGCTGGT CGGCCCGACC CTGCGGGAGC TGTCCACCGG GACCCGGGTG
CTCGCCGTGA TCACCGCGGC CGCGAACGCG GACACCGGCG GAGACGTGAA TCTGGACAGC
GGCGTGAATC TGGACAGCGG CGCGGACACC GACGGCGGCG TGGAGCGGGA CGGCCAGGGG
GCTCCCGGTG GCGGGCCGGA CTACCGGCCG GGACGCCACA CCCGGCTCCG GCCCGGGGAC
GAGCTGTTCG TGGTGGGACC GGTGAACCGG ATCGTCGACA TGGTGCGGCG CAACCAGCAG
GTCGACATCA CCACGGCGGG AACTGCGTAA
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| Protein sequence | MAAGSGSPGV TGGNGTVNVH GALDGHGTVN VHGALSGHGA VNGQGGSGGS GAFGGLGGSG
GSDSSGHVIV CGLSNLGLRL AEQLRASGVT VVAIDDRVAP ATRRRVERWG VRVLVESTRG
AGALREAGIA AALAVVSCHE TDLDNLGTAL VAAETAPGVR LVVAISNRQL GDQLADALSQ
VRVLNRAELA GPSFVEACLR SDVTHAFPMD ERSDAEVFAV IEESIIGRHA FRARYGDLTP
ISLRRAGERL PELCPPRDVS LRPGDRLTLL GRLSEFHERG MTVAGLHDAR LFAALAGGSA
EHGDPGDPRE PGGVRGVWRA TVARFREIVS MIRGELDPPF RFALAAVVTI MMVGTVVLWL
TYANHNEAAP AEFGPLDALY LTVATMATVG YGDFNFGAAD EWLQVFGIGL MLLGALSIAV
VYAFITNIII SRRLERVMGR GRAGAVRGHV ILCRLGSVGV ATMNGLVRAG RHVVVIERDE
NNRYLPVARE RGVPVIIGDA TVRSTLLEAG LAHAATIAVL TSDDVANLEA VLSAREAHEE
LRGAWAARRP ARRAARRGGG WSRGRMRESD PDTHHPDLRV VLRIFDTTMA DEVERRFGIH
TARSASALAT PYFVGAALGY DVISTFYVQR TPFLVARMTI HAGGGLVGPT LRELSTGTRV
LAVITAAANA DTGGDVNLDS GVNLDSGADT DGGVERDGQG APGGGPDYRP GRHTRLRPGD
ELFVVGPVNR IVDMVRRNQQ VDITTAGTA
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