Gene Francci3_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2938 
Symbol 
ID3903753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3468126 
End bp3468590 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID637880259 
Producthypothetical protein 
Protein accessionYP_482025 
Protein GI86741625 
COG category[S] Function unknown 
COG ID[COG5500] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.418548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0599766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCGG CGCTGGTCGT GATCTCTCTC GTATTGACCG GGCTGGTGGC GGGCACGTTG 
ACGGTCGGCC TGGTCGCCGT ACGGCCCGCG ATGCATTCAC TGCCGCCCAC TCCCTACGTA
ATGGTCAAGC AGGCGTTCGA CATCAGCTAC CCGCGGATGA TGAAGCTGCT GCAGATTACA
AATCTGATCG CTACGATCGC CCTGGCGGTC GCGGCCGGCG TCACCGGTGC GACGGCCTGC
GCGGTGCTGG CCGGCATCGT GGCGGCCTGC GTCCTCACCA ACATCCTGGT CACCGTGCGC
GGCGACCTTC CGATCAACAA CGCCATGGCC ACCTGGCGGC CGGAGTCTCC GCCGGCCGAC
TGGCGCGAGC AGCGGGCGCG CTGGGACTTC TTCAACAGCA TCCGCACGAC CGCCGCGGTG
ATCGCGCTGG TTCTGCTGGC CCTGGCCGCG ACCACCCAGT ACTAA
 
Protein sequence
MVSALVVISL VLTGLVAGTL TVGLVAVRPA MHSLPPTPYV MVKQAFDISY PRMMKLLQIT 
NLIATIALAV AAGVTGATAC AVLAGIVAAC VLTNILVTVR GDLPINNAMA TWRPESPPAD
WREQRARWDF FNSIRTTAAV IALVLLALAA TTQY