| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2937 |
|---|
| Symbol | |
|---|
| ID | 3903752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3467230 |
|---|
| End bp | 3467811 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637880258 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_482024 |
|---|
| Protein GI | 86741624 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0625018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCCC GTCGCTACGA GCAACGGCTG CGCACGGCTG GTGCGGACCA GACCCGCCGC
CGGATCCTCG ACGCGATGTA CGAACAGCTG CCCCGGCTCG CGAGCGTGGA GGCGGTCGCG
CGGCAGGCGG GCGTGGCCCG GTCGACGGTC TACCTGGTGT TCGGCTCCCG AGCGGGGCTG
TTCGATGCCC TCACCCAGGA CGTGCTCGAC CGGGGCGGTT TCGCGGACCT GGTGCGGGCC
GTGCAGGATC CGGACCCACT CGTTCACCTG CGCGGCGGGA TCACCGCAAG CGTGCGGGTG
TACGCCGGGC AGCGCGACGC CCTGTGGGCC CTGCGCTCGA TGGAACAGGC GCTCGATGGC
GCGCTGCAAC GGGCCGAGCA GGACCGTCTC GGCGGGATGG AACATCTCGC CGAACGCCTG
GCCGCCCACG GCCTCCTGCG CGTGCCGGTG GCCGCCGCGG TCGACGTCCT CTGGCTGCTT
ACCAGCTTCG ACGCGTTCGA CCTGCTCTAC ACCGGCCGCC GGCTGTCGGT CGACGAGGTC
GCGGCCCGGC TCCTGGCGAC CGCCGAGCAC GCGCTGCTCT GA
|
|---|
| Protein sequence | MSPRRYEQRL RTAGADQTRR RILDAMYEQL PRLASVEAVA RQAGVARSTV YLVFGSRAGL
FDALTQDVLD RGGFADLVRA VQDPDPLVHL RGGITASVRV YAGQRDALWA LRSMEQALDG
ALQRAEQDRL GGMEHLAERL AAHGLLRVPV AAAVDVLWLL TSFDAFDLLY TGRRLSVDEV
AARLLATAEH ALL
|
|---|
| |