Gene Francci3_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2934 
Symbol 
ID3903749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3463795 
End bp3465003 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID637880255 
Productmonooxygenase, FAD-binding 
Protein accessionYP_482021 
Protein GI86741621 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0750661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACG TGATTGTCGT GGGAGCGCGC TGCGCCGGCT CACCTGTGGC GATGTTGCTT 
GCCCGGCGCG GTCACCGGGT GCTGCTCGTC GACCGCGTGT CCTTTCCCAG CGACACGATC
TCCACCCACT ATCTTCAGCA GGCCGCACTG CTCCGTCTGC GGGAGTGGGG GCTGCTCGAC
GCACTCACGG CGACCAACTG CCGGCCGATC ACCGACATGA CGGTGTCCCA CCTCGGTGTG
GTCATCCGCG GGTTCGCCGA TCCGGTCGAC GGGCTGGCGT TCTCGATGGC GCCGCGCCGC
ATCGTGCTGG ACAAGCTCCT GCTCGACGGC GCGGTCGCGG CGGGTGTCGA AGTCCGGGAG
GGCTTCTCGG TCCGAGATCT GATCCGTCAC GACGACGGCA CGGTCGCGGG GATCGTGGGC
CGGGACGCCA CGGGAGCCGT CGTCGAGGAG CGGGCCACTC TCGTCGTGGG CGCCGACGGC
CGCAACTCCG TCGTGGCCGA CCTGGTGGGA GCCGACTTCT ACAAGGTCGT GCCGGCGGCC
AGCTTCATCT ACTACTCCTA TTTCAGTGGG CTGGACTGGC AGTTCCACAG CCGGTTCGGT
GACCACGAGC AGTGCGCCGG CTGGCCCACC CATGACGGGC TCACCCTCGT CACCGCGATG
CGCAACCTCG AGGATTTCGA GGAGTTCCGC GCCGATATCG ACGGGAGCCT GCGCCGGACC
TTCCGCAGCG TCGCGCCCGA GCTCGCCGAG GATCTCGACA GCCATGGCGT CCAGGAGGAC
CGTTACTACG GAATCCGTTA TCCGGACAAC TACTACCGCA CGTCCTATGG TCCGGGTTGG
GCGCTGACCG GAGACGCTGG TTACCACAAG GACCCGGTGA CCGGTCTGGG CATCACCGAC
GCCTTCCGCT GCGCGGACCT GTTGACCGAG CACGTGGACC AGGCGCTGCG TGGCGACCGG
CCCATGGACG AGGCCCTCGC CGAGTATCAG CGGTTGCGCG ACGAGGAATC GGCCGGTGCG
TTCAATTTCA CCACGACGCT GGGCGAGCTG AACTTCCCGC CGCACCTCGT GGCGCTGTGG
CGGGCCTTGC CGAACAACGA GACGGCGCGG GCGCAGTTCT TCGGAATGAT CGCGGGTGTC
GTGCCGTCGT CGGTCTTTCT CGCGCCGGAG AACGTCGAGT CCATCATGTT GGCCGCGGCG
GCCGTGTAA
 
Protein sequence
MYDVIVVGAR CAGSPVAMLL ARRGHRVLLV DRVSFPSDTI STHYLQQAAL LRLREWGLLD 
ALTATNCRPI TDMTVSHLGV VIRGFADPVD GLAFSMAPRR IVLDKLLLDG AVAAGVEVRE
GFSVRDLIRH DDGTVAGIVG RDATGAVVEE RATLVVGADG RNSVVADLVG ADFYKVVPAA
SFIYYSYFSG LDWQFHSRFG DHEQCAGWPT HDGLTLVTAM RNLEDFEEFR ADIDGSLRRT
FRSVAPELAE DLDSHGVQED RYYGIRYPDN YYRTSYGPGW ALTGDAGYHK DPVTGLGITD
AFRCADLLTE HVDQALRGDR PMDEALAEYQ RLRDEESAGA FNFTTTLGEL NFPPHLVALW
RALPNNETAR AQFFGMIAGV VPSSVFLAPE NVESIMLAAA AV