| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2929 |
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| Symbol | |
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| ID | 3903993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3450326 |
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| End bp | 3451987 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637880250 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_482016 |
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| Protein GI | 86741616 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0103438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.46056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGACGA CGACAACGAC GGTCCGTGGC GCGCCGGCGA CGCCGCGCCC TGGATCGGGC
GGGCCGCGGC TCGCGCGATC CGCCCAGGAG ATCCACGACC TGCTCGCCCG GCTGGACGCG
CCCTGCGTCG TGGTGAGCGA ACAGGGCGGC GCGATCGCGG CCACCGACGA CCCGGCGAGC
CTGCGCGCGG CGGGGGCGAC GGTGCTGGCT GTGGCGCCGC CGGCCCGCCC CGAGCGGCTG
GGAGCCGCGT CCTTCCTGAC CGACTACGGG GTGCGTCAGC CCTACATGAC CGGCGCGATG
GCGAACGGCA TCGCTTCGCC GGAGCTGGTC GTGGCGATGG CACGGGCGGG CTTCCTCGCC
ACGTACGGGG CGGCCGGCGT GCTGCCCGAC CGGATCGACG ACGCGCTTGG GCGGATCCGC
CGTGAGCTCG GCCCGGCGCC CTTCGCCTGC AATCTGATCC ACAGCCCGAA CGAGCTGGAG
CTGGAACGGG CCATCCTGGC CGCCTGCCTG CGCCACGGGG TGACCTGCGT GGAGGCGTCC
GCGTTCCTGG AGCTGACCCC GCAGATCGTC GCCTACCGGG CCGCGGGGCT GCGGCCGGGC
GGCGCTGGCG GCGTACACGT CGGGCACCGG GTGGTGGCCA AGGTCTCCCG CGGGGAGGTG
GCCGAGCTCT TCCTGCGCCC CGCCCCGGAC GCGCTGCTGC GCCCGCTGGT GGCGGATGGC
ACCCTGACCG CCGAGCAGGC CGCGCTCGCC CGCACGGTGC CGATGGCCGA CGACATCACC
GTCGAGGCGG ACTCCGGCGG CCACACCGAC CGCCGGCCGC TCCCGGTCCT GCTCCCCGAG
ATCATCGCGG TGCGCGACCG GATCGCCGCC GAGCTCGGCT ACCGCCGCCC GCCGAGAGTG
GGAGCCGCGG GTGGCATCGG TACGCCATCG GCGGTGTTCG CCGCGTTCGC GCTCGGCGCA
GCCTACGTCG TCACCGGTTC GGTGAACCAG GCGTGCGTCG AGTCCGGTCA GTCGGCGGCG
GCGCGGGCGC TGCTGGCGAA GGCGGGCCCG AACGACATCG ACATGGCGCC GGCCTCCGAC
ATGTTCGAGA TCGGCGCCGA GGTGCAGGTC CTGCGCCGCG GCACGATGTT CGCCGGGCGG
GGCCGCCGGC TGTACGACCT CTACCGCGCC CACGACTCCC TCGACGACCT TTCGGCGGAG
GATCGGAACT GGCTGGAGCG TTCGGTCCTG CGCCGGTCCG TGGACGAGGT ATGGGCCGAC
ACCGTCGACT ACTTCAGCCG GCGCGACCCG GAGCAGATCG AACGCGCGCA GGCCAACCCG
AAGAGACGGA TGGCGCTGGT GTTCCGCTGG TATCTCGGGC TGTCCTCGGG CTGGGCGATC
TCCGCCGCGC CCGACCGGAT CACCGACTAC CAGATCTGGT GCGGCCCGTC CCTGGGCGCC
TTCAACACCT GGGCGGCCGG CAGCTACCTG GCGGACGTCG ACCGGCGCAG CGCGGTGGAC
GTCGCGGGTG AGCTGATGCT CGGCGCCGCC TACACCGGGC GGGCCGCGGC GCTGCGGTTC
GCCGGGGTGC GGCTGCCGGC GCGGGCGGCC GCCTACCGAC CGCCGGCCAC GCGCGAGAGC
TCGCCGGCGC ACCGGTACGT CCTGACGGCG GGTGCCCGGT GA
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| Protein sequence | MVTTTTTVRG APATPRPGSG GPRLARSAQE IHDLLARLDA PCVVVSEQGG AIAATDDPAS
LRAAGATVLA VAPPARPERL GAASFLTDYG VRQPYMTGAM ANGIASPELV VAMARAGFLA
TYGAAGVLPD RIDDALGRIR RELGPAPFAC NLIHSPNELE LERAILAACL RHGVTCVEAS
AFLELTPQIV AYRAAGLRPG GAGGVHVGHR VVAKVSRGEV AELFLRPAPD ALLRPLVADG
TLTAEQAALA RTVPMADDIT VEADSGGHTD RRPLPVLLPE IIAVRDRIAA ELGYRRPPRV
GAAGGIGTPS AVFAAFALGA AYVVTGSVNQ ACVESGQSAA ARALLAKAGP NDIDMAPASD
MFEIGAEVQV LRRGTMFAGR GRRLYDLYRA HDSLDDLSAE DRNWLERSVL RRSVDEVWAD
TVDYFSRRDP EQIERAQANP KRRMALVFRW YLGLSSGWAI SAAPDRITDY QIWCGPSLGA
FNTWAAGSYL ADVDRRSAVD VAGELMLGAA YTGRAAALRF AGVRLPARAA AYRPPATRES
SPAHRYVLTA GAR
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