Gene Francci3_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2924 
Symbol 
ID3903988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3444851 
End bp3445384 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID637880245 
ProductMaoC-like dehydratase 
Protein accessionYP_482011 
Protein GI86741611 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.45225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0805169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCAG GGGCATCCCC TCCCCCGCGG ACCGAGCGGA CCGAGCGGAC CGAGCGAGAA 
TGTCGGCGCG TCGAGGAACG GGGGCTGTGG TTCGACGAGC TGGAGACCGA CGTCGTCTAC
GTCCACCGGC CCGGGCGGAC CGTGAGCGAA GCCGACAACA CCCTGTTCAG CACGCTGACG
ATGAACACCC AGGCGCTGCA CCTCGACGAG GCATGGAGCA CGACCCAGAC CTTCGGCACT
CGGCTGGTCA ACAGCATGTT CACCCTCGCG ACGCTGGTCG GCCTGTCGGT GAGCCGGCTG
ACCCAGGGAA CGACCGTGGC CAACCTCGGA TTCACCGAGA TCCGCTTCCC CGCACCGGTG
TTCCCCGGCG ACACGCTCTA CGCCGAGACC GTGGTACGCG ACAAGCGGCT CTCCCGCAGC
CGACCCGGGC AGGGGGTGGT CACCTTCGAG CACACCGCGC GCAACCAGCA CGGTGACGTG
GTAGCCGTGG CGGTACGGTC CGCGCTGATG CTGCGCCGGG CGGCGGACCG GTGA
 
Protein sequence
MEAGASPPPR TERTERTERE CRRVEERGLW FDELETDVVY VHRPGRTVSE ADNTLFSTLT 
MNTQALHLDE AWSTTQTFGT RLVNSMFTLA TLVGLSVSRL TQGTTVANLG FTEIRFPAPV
FPGDTLYAET VVRDKRLSRS RPGQGVVTFE HTARNQHGDV VAVAVRSALM LRRAADR