Gene Francci3_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2912 
Symbol 
ID3903976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3431134 
End bp3431631 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID637880233 
ProductRossmann fold nucleotide-binding protein-like 
Protein accessionYP_481999 
Protein GI86741599 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.492417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCCGA CGGGCCCACC AGGGTCTCTA CTATCCCGCC GGGCCTCGAT AAAACGTGAC 
GAAGCGTGCA GGGCGCGGCG TGTCCGATGC GGCGCGCGGT CGCCCGACCG GCTCACCGGC
GGGAGGATCG ACGGGTGTGG CGGGACGGAC GGATGCGGCG GGACGGACGG ATGCGGCGGG
ACGACGATCG GGCTGCTGCC GGGCCTGTCC CGGGACGAGG GAAACGACCA TCTCACCGTC
AGCCTCCCGA CCGGGATGGG CGAGCTGCGC AACGGCCTGC TCGTCCGCGG CAGCGACGCG
TTGGTCGCCG TCGGCGGAAG CTGGGGAACG CTCAGTGAGA TCTCCTTCGC GCTCCGGACC
GGGAAGACGG TGATCGGTCT CGACACCTGG GCCGTGGACA CCCGGGATTC ATCGCTGCCG
ACCGTCATCC CGGTCCAGGA TGTTGACGAT GTGGTGCCGC TCCTTCCAGC ACACCTCAAT
GATGCCGGCC CTCGATGA
 
Protein sequence
MGPTGPPGSL LSRRASIKRD EACRARRVRC GARSPDRLTG GRIDGCGGTD GCGGTDGCGG 
TTIGLLPGLS RDEGNDHLTV SLPTGMGELR NGLLVRGSDA LVAVGGSWGT LSEISFALRT
GKTVIGLDTW AVDTRDSSLP TVIPVQDVDD VVPLLPAHLN DAGPR