Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2909 |
Symbol | |
ID | 3903973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3423987 |
End bp | 3426194 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637880230 |
Product | peptidase S9, prolyl oligopeptidase active site region |
Protein accession | YP_481996 |
Protein GI | 86741596 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.390736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGAC CCGCGGTGGT GGCGCAGCCG GTGGTGGGAC GGCCGGTGGT GGGACGGCCG GTGGTGGCGC ACACCGTCGA CTCCGGGCGT CCCGGCGATC TGTCCGACGC CTGGGTCGCG GCGGCGAGCT GTCGCGCACC GAGTACCGGC CCGCATGGTC GGCTCGCCTT CGTCGGCGAT CGCGGCGGCG CCCCCGCGCT GTGGATCCGG GACCCGGATG GCCGGGAGCG CCCGGTTGAC ACCGGCCCCG GTCATGTCCG GGCGGTCCTG TGGTCGCCGA CCGACGACCG GATCGCCGTC CACGTCGCGC CGGGCGGCGG GGAGCTCACC GAGGTCCGGA CCGTCCGGGC GGACGGCGGT GACCTGCGCC ACCTGGCCGG CGGCGGGAGG CGGGCCGCCA CCCCAGCCCG CTGGACCGAC GACGGCCACG GCCTCGTCGT GACCGAGTCC GACCGCTCCG ATCCGTCCGG CCGCACCGCC GCGGTGCTGA TCGACTCCGA CGGGCGACGG ACCCGCCTCG CCGCCGGAGT GGCGCTGCAG GTGTGCGACG TCGTCGTTCT CCCCGACCCC GCGCCGGACG GGACGGGGAG CGGCGGTCCG GGGCGGGGCC CGGCCGGTGG CGGGTACCGC CTGCTGCTGC GGGAGGGCCC CCGTGGCGTC CGGCGGGTGC TCGTGGTCGA CACCATGATC GCAGCCAGGG AGGGGATCGC AGCCAGGGAG GGGATCGCAG CCAGGGAGGG GATCGCAGCC AGGGAGGGGA TCGCAGCCAG GGAGGGGATC GCAGCCAGGG AGGGGATCGG CGGGTCATGG CAGGTGCCCG GCGGGACGGC GACCACCGTG ACCGGTCGGT TCGTCGCCGA CGGCCGTCGC CTGCTGCTGC TGTGCGACAT CGGGCGGGAC CGGGCCGCGT TGTTCGACGT CCCCGTCGAC CCCACGGGCG ATCCGACCGG CGGGCCGCGG GTCCTCGCCG CCCGGGATGA CGCCGATCTG GAGCGGTTCG CCCTGCTCGA TCCGGATCGG GCGGTCGTCG TCTGGAACGT GGGCGGGCGC AGCGAGCTCG CGCTGGTCGA TCTGCCCACC GGACGGTCAC TGACGCTGCC GCCGCTTCCC CGCGACGTCG TCACCGGCGT GCTCGTCCGG CCCGGGGGGC GGGAGCTCGT GCTTGCCCTG GATGGTGCCA CCAGGCCGGG GGAGATCTGG ACCTGGGATC TCACCGCGCC ATCCGCCGGC TACCGTCGGC TGATCTCGCA CGCTCCCGTC GAGGCAGTGA CCATCCCGGG ACCGCGGGTC GTCCTGAACA TCGACGTTGA CGGCCTGGGA TCCGACAGCC CGGGGCCATC CGGGCCATCC GGGCCATCCA TGCCATCCGG GCTATCCGCG CCGGCGCGTG TACCCGGGAT CCCCGGGCCC CGCACCGGTG ACCACCCGCG GCTGGTCCGT CCGGTGCCGT GCGCCCTGCC GGCCCACGAC GGCCGGGAAC TGTCCGGTTG GTGGTACCGC CCGCACGGCC CGCGAGGACC GGTCCCGACC CTGCTCCACC TGCACGGCGG CCCGGAGGCG CAGGAGCGTC CCGTCTACAA CCCGCTGTTC CAGGCCGTGC TCGCCCGGGG GATCGCGGTG TTCGCGCCGA ACGTGCGCGG CTCCACCGGA TTCGGCCGGT CGTTCGAGGA GGCCGATCAC ACCCATCGTC GGTTCGGCGG CATCGCCGAC GTCCGCAGCT GCGTGGCGCA TCTGGTCGCG ACGGGCCTGG CTGACCCGGA CCGGATCGGC GTCGCCGGCC GCTCCTACGG CGGCTATCTG ACGCTGGCGG CGATGGTCCA CTTCCCGGAG CTGTTCCGGG TCGGGGTAGA CGTCTGCGGG ATGGTTGATC TGGAGAGCTT CTATCAGTAC ACCGAGCCGT GGATCGCCGC GTCCGCGGTC ACCAAGTACG GTGATCCACG CACCGAGCCG GCGTTGCTGC GGGCGCTGTC CCCGCTGCAC CGGATGAGCG CCCTCGCCGC GCCGTTGCTC GTCGTGCATG GGGAGAACGA CACCAACGTC CCGGTGATCG AGGCGGAGCA GACGGTCGCC GCGGCCCTCG CTCGCGGCGT CGACTGCCGT TACCTGCTCT TTCCCGGCGA GGGGCACGAG ATCGCGGATC TGCGCCACCG CAGGTCGTTC GTCCGAGCGG TCGTCGACTG GCTGACCCCC CGGCTGCTGA CCCCCTGA
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Protein sequence | MIRPAVVAQP VVGRPVVGRP VVAHTVDSGR PGDLSDAWVA AASCRAPSTG PHGRLAFVGD RGGAPALWIR DPDGRERPVD TGPGHVRAVL WSPTDDRIAV HVAPGGGELT EVRTVRADGG DLRHLAGGGR RAATPARWTD DGHGLVVTES DRSDPSGRTA AVLIDSDGRR TRLAAGVALQ VCDVVVLPDP APDGTGSGGP GRGPAGGGYR LLLREGPRGV RRVLVVDTMI AAREGIAARE GIAAREGIAA REGIAAREGI AAREGIGGSW QVPGGTATTV TGRFVADGRR LLLLCDIGRD RAALFDVPVD PTGDPTGGPR VLAARDDADL ERFALLDPDR AVVVWNVGGR SELALVDLPT GRSLTLPPLP RDVVTGVLVR PGGRELVLAL DGATRPGEIW TWDLTAPSAG YRRLISHAPV EAVTIPGPRV VLNIDVDGLG SDSPGPSGPS GPSMPSGLSA PARVPGIPGP RTGDHPRLVR PVPCALPAHD GRELSGWWYR PHGPRGPVPT LLHLHGGPEA QERPVYNPLF QAVLARGIAV FAPNVRGSTG FGRSFEEADH THRRFGGIAD VRSCVAHLVA TGLADPDRIG VAGRSYGGYL TLAAMVHFPE LFRVGVDVCG MVDLESFYQY TEPWIAASAV TKYGDPRTEP ALLRALSPLH RMSALAAPLL VVHGENDTNV PVIEAEQTVA AALARGVDCR YLLFPGEGHE IADLRHRRSF VRAVVDWLTP RLLTP
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