Gene Francci3_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2907 
Symbol 
ID3903971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3422632 
End bp3423411 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID637880228 
ProductSpoOM 
Protein accessionYP_481994 
Protein GI86741594 
COG category[R] General function prediction only 
COG ID[COG4326] Sporulation control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.741402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATGA AGCGGTTCAT GTCGCGGCTC GGCGTGGGCG GGGCCGCGGT CGAGACCGTG 
CTGGACCGTC CGGAAACCCT GCCGGGCCAG GTCGTGACCG GTCTGACCAC CGTCACCGGC
GGCAAGGTCG AGCAGAAGAT CGAGAAGGTC CTCGTCGCGC TCGAGGCGAC CGTCGAGGTC
GAGACCGACG ACTCGACCTG GCACGAGCAG GTCACCTTCG GTACCCAGCA GATCGGTGGC
GGCTTCACTA TCCACCCGGA GCAGCAGATC AGCGGCCGCT TCGAGCTGCC CGTGCCGTGG
CAGACCCCGA TCACCGACAT CGGCGGGTGG CATCTGCACG GGATGAAGAT CGGGGTGCGG
ACCAAGCTGG CCATCCCCGG GGCGGTGGAC CCGGGTGACC TCGACGCGGT GAACGTGCAC
CCGCTGCCCG TCCAGGAGGC GGTGCTCGCC GCCCTCGGTG ACCTCGGCTT CCACTTCAAG
TCCGCCGACG TCGAGAAGGG CCGCCTACAC GGCTCCGACC TGCCCTTCTA CCAGGAGATC
GAGCTGAAGC CGTCGGGCGA GTACGCCCGG CGCATCTCCG AACTGGAGGT CACCTTCCTC
GTCGACGGCT CCGGGGTGGA CGTCGTCCTG GAGGCCGACC GCCGCGGTGG GCTGCTGTCC
TCCGGCGGCG ACGAGCTCAG CCGGTTCCGG CTCGGCCACC ACGACACCGA CCGGCACCAG
CTCGCCGGGC TGCTCCACCA GCAGCTGGAG CACCTGGGCC GCCGCCGCGG CTGGTTCTGA
 
Protein sequence
MGMKRFMSRL GVGGAAVETV LDRPETLPGQ VVTGLTTVTG GKVEQKIEKV LVALEATVEV 
ETDDSTWHEQ VTFGTQQIGG GFTIHPEQQI SGRFELPVPW QTPITDIGGW HLHGMKIGVR
TKLAIPGAVD PGDLDAVNVH PLPVQEAVLA ALGDLGFHFK SADVEKGRLH GSDLPFYQEI
ELKPSGEYAR RISELEVTFL VDGSGVDVVL EADRRGGLLS SGGDELSRFR LGHHDTDRHQ
LAGLLHQQLE HLGRRRGWF