Gene Francci3_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2881 
Symbol 
ID3906012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3397962 
End bp3398312 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content67% 
IMG OID637880202 
Producthypothetical protein 
Protein accessionYP_481968 
Protein GI86741568 
COG category[S] Function unknown 
COG ID[COG4683] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00385493 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.579337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAACG AGTTCCTGGC CTGGGTCAAC GAGCTCGATC CGAGGTCCAG GGCGCTCGTC 
GTCGACGCGA TCGATCGGCT GGCCGATGCC GGGCCAAGCC TGGGCCGACC ACTGGTCGAC
CGCCTGGTCG GCTCGGAGAT CCACAATCTC AAGGAGCTCA GGCCAGCTTC CGCGGGCACC
TCGGAGATCC GCGTCCTGTT CGTCTTCGAT CCCTGGCGCT GCGCCATCCT GCTGGTCGGT
GGGGACAAGT CGGGCGACTG GTCCGGCTGG TACCGCACGG CGATCCCACG CGCGGAGACG
CTGTACGCCG AGTACATGAA GGAACGGGAA GCCGAGGAGG GCAGCTCATG A
 
Protein sequence
MTNEFLAWVN ELDPRSRALV VDAIDRLADA GPSLGRPLVD RLVGSEIHNL KELRPASAGT 
SEIRVLFVFD PWRCAILLVG GDKSGDWSGW YRTAIPRAET LYAEYMKERE AEEGSS