Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2870 |
Symbol | |
ID | 3906001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3382315 |
End bp | 3383763 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637880191 |
Product | cyclopropane-fatty-acyl-phospholipid synthase |
Protein accession | YP_481957 |
Protein GI | 86741557 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.24578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGATCA GTCGACAGCC GGCGGAGCAC GACCCTGCCG AAGCGACCAT TCCGCGCCGG GAGCCGCAGT GGTCACCGAA CGTGGCGCGG GCGACGCGCA TCTTGTTCGA GAGCCTGATC GGGGACGACC CGCCGGTACG GATCGCGCTG TGGGACGGCT CGGTGCTGGG ACCGGACACC ACCACCCGGA TCCTGGTCCG CTCGCCGGAG GCGCTGCGCC GCATTCTGTT CCGCCCGGGT GAGCTGGGCT TCGCGCGGGC CTTCGTCGCC GGGGAGATCG ACGTCGAGGG GGACATCTTC GCCGCCCTCG CGGTGCGCCG AGGCATCGCC GGTGCCGGCT CGCGGCTGAC CGGCGCGACC GCCCGCGCCG CCGCGACCCT GCTGCGCGAA CTCGGCCCGC GCATGCCGGC CCCGCCGCCC GAGGAGGCCC GGCTGCGCGG CCGGCAGCAC ACCCGGGACC GGGACGCGGC GGCGATATCC CATCACTACG ACGTGTCCAA TGCGTTCTAC CGCCTCATCC TCGGCCCGAC GATGACCTAT TCCTGCGGGG TGTGGGAATC GGAGCAGGTC GGCCTGGACG CCGCCCAGAA CGCCAAGCAC GAGCTGGTCT GCCGCAAGCT GGGCCTGCGT CCCGGCGAGC GGTTGCTGGA CATCGGCTGC GGCTGGGGCA GCATGCTGAT CCACGCCGCC CGCCACCACG GGGTCCGCGG CGTGGGGGTG ACCATCTCGG TGGAACAGGC CACGCAGGCC CGCCGCCTCG TCGCCGAGGC GGACCTCGCC GACGTCATCG AGATCCGCCT GCAGGACTAC CGGGAAATCC CGGACGGCCC CTTCGACGCG ATCAGTTCCA TCGGCATGGT GGAACACGTC GGCCGGGCGA TGCTCCCGAC TTACTTCGAC CAGTTGTACC GGCTGCTGCG CCCCGGGGGG CGCCTGCTCA ACCACGGCAT CTCGTTTCCC GGCGACCCCG CGGGGGCCCG CCGGGCCCGG CCCGGCCTCG GCCCGGTCCC GTTGCCGAGG GGACGCGACT TCCTCCAGCG CTACGTCTTC CCGGACGGGG AACTACACGA GATCGGGGTC ATGGTCTCCC TGATGCAGGC GGCCGGTTTC GAGGCGCGCC ACGTCGAGTC CCTGCGCGAG CACTACGCGC TGACCCTGCG GGCCTGGGTA CGCCTGCTGG AGAAGAACTG GCCGGCCGCG GTCGGCATGG TCGGGGCGGG TCGGGCCCGC GTCTGGCGGC TCTACATGGC CGGATCGGCG CTGAGCTTCG AGAGCGGGCG GACCCAGATC CACCAGACCC TCGCGGTCCG GCCGGACGCC GGCACCGCCG GCATGCCCCT GCGGCCCCGC TTCGAGTCGC CCACGACCGC ACCGAGCCAG TCGACCGCAC CGACGCCCAC GACCGCACCG ACGCCCACGA CCGCACCGAG CCAGTCGACG GCCGGCTGA
|
Protein sequence | MTISRQPAEH DPAEATIPRR EPQWSPNVAR ATRILFESLI GDDPPVRIAL WDGSVLGPDT TTRILVRSPE ALRRILFRPG ELGFARAFVA GEIDVEGDIF AALAVRRGIA GAGSRLTGAT ARAAATLLRE LGPRMPAPPP EEARLRGRQH TRDRDAAAIS HHYDVSNAFY RLILGPTMTY SCGVWESEQV GLDAAQNAKH ELVCRKLGLR PGERLLDIGC GWGSMLIHAA RHHGVRGVGV TISVEQATQA RRLVAEADLA DVIEIRLQDY REIPDGPFDA ISSIGMVEHV GRAMLPTYFD QLYRLLRPGG RLLNHGISFP GDPAGARRAR PGLGPVPLPR GRDFLQRYVF PDGELHEIGV MVSLMQAAGF EARHVESLRE HYALTLRAWV RLLEKNWPAA VGMVGAGRAR VWRLYMAGSA LSFESGRTQI HQTLAVRPDA GTAGMPLRPR FESPTTAPSQ STAPTPTTAP TPTTAPSQST AG
|
| |