Gene Francci3_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2870 
Symbol 
ID3906001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3382315 
End bp3383763 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content73% 
IMG OID637880191 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_481957 
Protein GI86741557 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.24578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATCA GTCGACAGCC GGCGGAGCAC GACCCTGCCG AAGCGACCAT TCCGCGCCGG 
GAGCCGCAGT GGTCACCGAA CGTGGCGCGG GCGACGCGCA TCTTGTTCGA GAGCCTGATC
GGGGACGACC CGCCGGTACG GATCGCGCTG TGGGACGGCT CGGTGCTGGG ACCGGACACC
ACCACCCGGA TCCTGGTCCG CTCGCCGGAG GCGCTGCGCC GCATTCTGTT CCGCCCGGGT
GAGCTGGGCT TCGCGCGGGC CTTCGTCGCC GGGGAGATCG ACGTCGAGGG GGACATCTTC
GCCGCCCTCG CGGTGCGCCG AGGCATCGCC GGTGCCGGCT CGCGGCTGAC CGGCGCGACC
GCCCGCGCCG CCGCGACCCT GCTGCGCGAA CTCGGCCCGC GCATGCCGGC CCCGCCGCCC
GAGGAGGCCC GGCTGCGCGG CCGGCAGCAC ACCCGGGACC GGGACGCGGC GGCGATATCC
CATCACTACG ACGTGTCCAA TGCGTTCTAC CGCCTCATCC TCGGCCCGAC GATGACCTAT
TCCTGCGGGG TGTGGGAATC GGAGCAGGTC GGCCTGGACG CCGCCCAGAA CGCCAAGCAC
GAGCTGGTCT GCCGCAAGCT GGGCCTGCGT CCCGGCGAGC GGTTGCTGGA CATCGGCTGC
GGCTGGGGCA GCATGCTGAT CCACGCCGCC CGCCACCACG GGGTCCGCGG CGTGGGGGTG
ACCATCTCGG TGGAACAGGC CACGCAGGCC CGCCGCCTCG TCGCCGAGGC GGACCTCGCC
GACGTCATCG AGATCCGCCT GCAGGACTAC CGGGAAATCC CGGACGGCCC CTTCGACGCG
ATCAGTTCCA TCGGCATGGT GGAACACGTC GGCCGGGCGA TGCTCCCGAC TTACTTCGAC
CAGTTGTACC GGCTGCTGCG CCCCGGGGGG CGCCTGCTCA ACCACGGCAT CTCGTTTCCC
GGCGACCCCG CGGGGGCCCG CCGGGCCCGG CCCGGCCTCG GCCCGGTCCC GTTGCCGAGG
GGACGCGACT TCCTCCAGCG CTACGTCTTC CCGGACGGGG AACTACACGA GATCGGGGTC
ATGGTCTCCC TGATGCAGGC GGCCGGTTTC GAGGCGCGCC ACGTCGAGTC CCTGCGCGAG
CACTACGCGC TGACCCTGCG GGCCTGGGTA CGCCTGCTGG AGAAGAACTG GCCGGCCGCG
GTCGGCATGG TCGGGGCGGG TCGGGCCCGC GTCTGGCGGC TCTACATGGC CGGATCGGCG
CTGAGCTTCG AGAGCGGGCG GACCCAGATC CACCAGACCC TCGCGGTCCG GCCGGACGCC
GGCACCGCCG GCATGCCCCT GCGGCCCCGC TTCGAGTCGC CCACGACCGC ACCGAGCCAG
TCGACCGCAC CGACGCCCAC GACCGCACCG ACGCCCACGA CCGCACCGAG CCAGTCGACG
GCCGGCTGA
 
Protein sequence
MTISRQPAEH DPAEATIPRR EPQWSPNVAR ATRILFESLI GDDPPVRIAL WDGSVLGPDT 
TTRILVRSPE ALRRILFRPG ELGFARAFVA GEIDVEGDIF AALAVRRGIA GAGSRLTGAT
ARAAATLLRE LGPRMPAPPP EEARLRGRQH TRDRDAAAIS HHYDVSNAFY RLILGPTMTY
SCGVWESEQV GLDAAQNAKH ELVCRKLGLR PGERLLDIGC GWGSMLIHAA RHHGVRGVGV
TISVEQATQA RRLVAEADLA DVIEIRLQDY REIPDGPFDA ISSIGMVEHV GRAMLPTYFD
QLYRLLRPGG RLLNHGISFP GDPAGARRAR PGLGPVPLPR GRDFLQRYVF PDGELHEIGV
MVSLMQAAGF EARHVESLRE HYALTLRAWV RLLEKNWPAA VGMVGAGRAR VWRLYMAGSA
LSFESGRTQI HQTLAVRPDA GTAGMPLRPR FESPTTAPSQ STAPTPTTAP TPTTAPSQST
AG