Gene Francci3_2861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2861 
Symbol 
ID3905992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3372554 
End bp3373327 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID637880182 
Productenoyl-CoA hydratase 
Protein accessionYP_481948 
Protein GI86741548 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.742849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC AGATCGAGAG CGAACCCGGC CAGGGCGCGC TGACGGTACG GATCAACCGC 
CCGGAGAAAC GCAACGCCCT CACCCAGGCG ATGTACCTCG CCCTCGCGGA GGCGTTCGAC
AAGGCCGAGA CCGACCCGGA GATCCGGGTC ATCCGGCTGA CCGGCAGCGG CGGATCCTTC
ACCGCCGGCA ACGATCTGGT CGACTTTCTG GCCGCCGACG CCCTCCGGGC GGAGGGTCCG
ACGCTGACCT TCATCCGGAC GCTGGCCCGC AGCACGAAAC TTCTCGTCGC CGAGGTCGAC
GGGCCCGCGA TGGGCATCGG GACCACGCTG CTGCTGCACT GCGACCTGGT CTACGCGACC
GAGCGCAGCA CCCTCGGGAT GCCGTTCGTC AATCTGGGGG TGATCCCCGA GTTCGGGTCG
ACCCTCCTGC TACCCCGCCG GGTCGGACCA GCCATCGCTG CCCGCCTCGT CTACTTCGGC
GAGTCCCTCG GAGCGGCCGA GGCCGCCCGA CTGGGGGTGG TGACCGAGGT ACTTCCCGAC
GCCGAAGCGC TACGCGCCCG GGTCGACGAC CGGGTGGCGG CGCTGCTGGC TCAGCCGCCG
CAGGCGCTCG CGGCAGCTCG CGCCCTGCTG CACGACGGCG GGACACCGGA GGTGTTGGCG
CGCATCGACG TCGAAAGCTC GATCTTCACC GAGCGCCTCG TCAGCGACGA GGCGAGATCC
GCGATGACCG CCAGGCTGCC GGGCCGCCAC GGCACGTCGG CAGCCGAGGG TTGA
 
Protein sequence
MSSQIESEPG QGALTVRINR PEKRNALTQA MYLALAEAFD KAETDPEIRV IRLTGSGGSF 
TAGNDLVDFL AADALRAEGP TLTFIRTLAR STKLLVAEVD GPAMGIGTTL LLHCDLVYAT
ERSTLGMPFV NLGVIPEFGS TLLLPRRVGP AIAARLVYFG ESLGAAEAAR LGVVTEVLPD
AEALRARVDD RVAALLAQPP QALAAARALL HDGGTPEVLA RIDVESSIFT ERLVSDEARS
AMTARLPGRH GTSAAEG