Gene Francci3_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2859 
Symbol 
ID3905990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3368092 
End bp3368511 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID637880180 
Producthypothetical protein 
Protein accessionYP_481946 
Protein GI86741546 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.816259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCGC TGGGGCCGTC CGAGAACATG AGCTGGTTGC TCAACAACCT CGTCAAGAAG 
GTGCCCGAAG TCACCTATGT GATTGCGCTT TCCTCTGACG GGTTGTTGCT CGCCACCTCG
TACGGGATGG ACCGGGCGAC CGCCGACCAA CTGGCCGCGG TGGCCTCCGG ATTCAACAGC
CTGGCGCGCG GCGCGGGTCG TTTCTTCGGG GGTGGAAACG TCCGGCAGAC CATTGTCGAG
ATGGACGAGG GATTCCTGTT CGTCACCGCG GTCGGGGATG GATCGTGCCT GGCCATTCTC
AGCAGCCCCG GCGCGGACAT CGGTCTCATC GCCTACGAGA TGGCGCTGCT GGTGACCCGG
GTCGGCGAGT TTCTCACCCC GGAACTCCGG GCTCAGATGC AGTCCGCGCT GCCACTCTGA
 
Protein sequence
MRPLGPSENM SWLLNNLVKK VPEVTYVIAL SSDGLLLATS YGMDRATADQ LAAVASGFNS 
LARGAGRFFG GGNVRQTIVE MDEGFLFVTA VGDGSCLAIL SSPGADIGLI AYEMALLVTR
VGEFLTPELR AQMQSALPL