Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2840 |
Symbol | |
ID | 3904752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3344701 |
End bp | 3346926 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880161 |
Product | AAA_5 ATPase associated with various cellular activities |
Protein accession | YP_481927 |
Protein GI | 86741527 |
COG category | [V] Defense mechanisms |
COG ID | [COG1401] GTPase subunit of restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.241934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATC AGCTAGAGAT CATCGGCGGG CTGCTGTACC GGGTTATGCG GATCTTGGCG GAGGTCGGCG AGGCGTCTCC GGACGAGCTG TGGATGCGGA TGCGTGCGTC CGATGCTGGC GCCGATCCCG GATGGCGGCG CGGATCAGGT GACGACCCGC GGAGCGCCGT CGCAAGGAAA CTCGTCCTGC GGGGCGCTGT CTACCTGGCC AGGGCCGGTC ATCTGAGTGA GAGCAACCGC CGGTGGCAGG CTACCGGAAT CGGCCGGGAT GCGTTGCGGG CGTCCCCGGA CGAGGCCGCG TGGTGGCGTG ATGTCACGGA GCACAACACT TACTGGCGGG AACACCGGAG CAGCCTTGGC CTGGTGGACG ACGTCCTCGC GGTGCTGCCC GAACAGACCT GGGTCAGCGT CACGGATCTC TCGACGGTGG CCGATCTGAC GGTCGATGGC CTCGTCCGCC ATCTGTGCGG CTTCCGCCCC GAGGGCTGGT CGCGCGTACT CGACCCGGCG GGCCGGCCGC CGCGCGAGGC CCTCTTCACC GAGGACGAGT ATCGCGACTG GCTGGACTGG TTCGAGGTCG AGGTCGGCGA CCTGACGGCG GGGCGGGCTG CCGGCGAGCT GCGGCTGCCG CTCGACGACC TCCGCATGCT CGTCGAGTCC ATCGCGCCGG AGCGGATCCC TCGCCGGGCC TGGCTGGTGC GCGGCGCGGA CCGGCGTGGC CGTTCGCTGG CGCGGGATCT CTGGCTGGCC GACGAGGTCT GTTCCCTGCC CGGTGACCGG CTGGAGGTGC GGCCCGGGGT CGACCGGGAG CAGGTGCGCC GGGCGGTCGA CCGCGAACAC GCCTCGCTCA CCTCGGCCCG GCGCGGCCGG CTCACCAGCG AGTACCACGC CTTCCTGAGC CGGATGCGGG AGAACGACCT CGTCGTCGTG AACGACCGTG ACGAGTACTA CGTCGGGGAG ATCCTCGGAC CGCCGGTGTT CGTCGCGAGC GTCGGGGGCG TCGCGGACCT GCAACGGCCG GTCCACTGGC GCAACGCCGA CGAGCCGGTG AACTACCTCG ATCTACCCGA TCGGGTGGCG GCCCTGCTCG GCAACGCGGA AGCGCGCATC GTCGATCTTT CCGATTTCGT CGCCGACCTC GACGCCCTGG TGCCCGCGCC CGCGCCGGTG GCATCGATCG CGACGACGGG GGCCGCCCCC CAGAGCGCCG ACGCCGACCT GGCCGGCCAG GCCCTCGCCG GCCAGGCCCT CGGCGGGGAC GATCTGCGCG AGGTCACGGA CGAGTTCGCG GACGGCCTCT TTTACAGCCG GGACTGGTTG CGCAGGTGCG TCGAGCTTCT GCGGGACCGG CCGCAGCTCA TCTTCTACGG CCCGCCCGGC ACCGGCAAGA CGTACCTCGC CCGGCGCTTG GCCTGGCATC TCGCCGACGA TCGGCGCGAG AACGTCACCC TCGTCCAGTT CCATCCGTCC TATATGTACG AGGACTTCTT CCAGGGTTTC CGTCCGGTGC AGGTGAAGGG CGGCGACGGT GACGCGGCCA CCACCAACCG GATGTCCTTC GAGCTCGTGG ACGGTCCGCT GCGCCGGCTC GCCACCGCCG CCGAGCTCAA TCCCCGCCAG GCGTTCTTCC TGATCATCGA TGAGATCAAC CGGGGTGACC TGGCCAGGAT TTTCGGTGAG CTGTACTTTC TGCTGGAATA CCGCGGGGAG GCCGTCACCA CCCAGTACGC CTCCGCGGAC ACGCGCGACT TCCAACTACC GAAGAACCTG TTCATCATCG GCACGATGAA CAGCGCGGAC CGTTCGATCG CCGCCTTCGA CCAGGCGCTG CGCCGGCGGT TCACCTTCGT CGGGCTCCAT CCGGACGTCG AACCGACCGC GTCCGTGCTG CGCCGCTGGC TTGCGGCAGG CGACCTGCCC GACGAGGCGG CCCGCCTGCT CGGCGAGCTG AACCGCCGCA TCGACGACCC GGACGCCCGC ATCGGCCCGT CCTATCTGAT GCGCGACCGC GTCCACCAGA GTGCCGACGG CCTCGACCGG GTGTGGGAAC ATCAGATCCT GCCGCTGCTG GCCGAACACC ACGTCGGCGA GACCATCGAT CTCGCGGCCC GGTACGGCCT ACCGGCGCTG CGGCAGTCCC TCGGCCTGGC CGCGGTGGTT CCGGCCGCGG TGGTTCCGGC CGCCGGAGTC CCCGCGAACA CCATCCCCGG CCCCGCGGCA GGCTGA
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Protein sequence | MADQLEIIGG LLYRVMRILA EVGEASPDEL WMRMRASDAG ADPGWRRGSG DDPRSAVARK LVLRGAVYLA RAGHLSESNR RWQATGIGRD ALRASPDEAA WWRDVTEHNT YWREHRSSLG LVDDVLAVLP EQTWVSVTDL STVADLTVDG LVRHLCGFRP EGWSRVLDPA GRPPREALFT EDEYRDWLDW FEVEVGDLTA GRAAGELRLP LDDLRMLVES IAPERIPRRA WLVRGADRRG RSLARDLWLA DEVCSLPGDR LEVRPGVDRE QVRRAVDREH ASLTSARRGR LTSEYHAFLS RMRENDLVVV NDRDEYYVGE ILGPPVFVAS VGGVADLQRP VHWRNADEPV NYLDLPDRVA ALLGNAEARI VDLSDFVADL DALVPAPAPV ASIATTGAAP QSADADLAGQ ALAGQALGGD DLREVTDEFA DGLFYSRDWL RRCVELLRDR PQLIFYGPPG TGKTYLARRL AWHLADDRRE NVTLVQFHPS YMYEDFFQGF RPVQVKGGDG DAATTNRMSF ELVDGPLRRL ATAAELNPRQ AFFLIIDEIN RGDLARIFGE LYFLLEYRGE AVTTQYASAD TRDFQLPKNL FIIGTMNSAD RSIAAFDQAL RRRFTFVGLH PDVEPTASVL RRWLAAGDLP DEAARLLGEL NRRIDDPDAR IGPSYLMRDR VHQSADGLDR VWEHQILPLL AEHHVGETID LAARYGLPAL RQSLGLAAVV PAAVVPAAGV PANTIPGPAA G
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