Gene Francci3_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2833 
Symbol 
ID3904745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3336743 
End bp3337990 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content72% 
IMG OID637880154 
ProductABC transporter related 
Protein accessionYP_481920 
Protein GI86741520 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAA TCCGGATCGA GGGCCTCACG AGGCGCTTCG GAAACGTCCG TGCGGTGGAC 
GACGTCTCCC TCGACGTGGC GGACGGCGAC TTCCTCGTTC TGCTGGGACC GAGCGGCTGC
GGGAAGACCA CGCTGCTGCG CATGATCGCC GGCCTGCTGG AGCCGAGCGA GGGACGCATC
ATGCTCGGCG ATCGCGACAT CACCCATGTC CCCGCCCGAC GGCGCGACCT CGCCATGGTC
TTCCAGAGCT ACGCGCTGTA CCCGCACCTG ACGGTCGAAC GCAACATCGG GTTTCCGCTG
CGGGCCGCGC GCCGCCCCAA GGCGGAGATC GCCCGGCGCG TCCGCGAGGT CGCCGACCAG
CTCGAACTCG GCGGGCTGCT CCACCGGCGC CCCCGTGAGC TGTCCGGCGG GCAGCGCCAA
CGGGTGGCGC TCGGCCGTGC GCTGGTCCGT GACCCCCAGG CGTTCCTCAT GGACGAACCC
CTCTCGAACC TCGACGCGAA ACTGCGCACC GCGACCCGCA CCGAGCTCGC CGGACTGCAC
CGCCGGCTGG GCCGGACCTT CATCTACGTC ACCCACGACC AGGTGGAGGC CATGTCGATG
GCAACCCGCG TGGTCCTGCT CAACGGCGGC CGCGTGGAAC AGGTGGGCAG CCCGACCGAG
GTCTACGACA CGCCGGCCTC GGTGTTCGTC GCCGGCTTCC TCGGCGCACC GCCGATGAAC
CTGATCGAGG CCCGGGTGGA GGCCGACGGC GACCTGCTGG CGGTCCGCGC GGACGGGCTG
CGCATCCCGC TGTGGCCGGG CTTCGACGAA CCCCGCGACG TCATCGTCGG TCTGCGACCC
GAGAACCTGA CGCTGTTGCC CGGCTCGGCC GAGTCGCCCC GCCCGGCCGA GCCGCCCCAC
CCGGCCGAGG CATCGACGGC ATCACCCGGC TTGACGGCAT CACCCGGGTC GACCGCGCAG
ATCGAAGGTG TCGTGACCAC GGTCGAGAAC CTCGGCAGCG AGGAGGTGGC CTGGTGCGAC
GTCCACGGTC AGGCCGTCGC GCTGCGTGGC CCCCGCCCGA TCGGACTGGC CGCCGGTGAC
CGGGCCCGAC TCACTGTCGA CGTCTCACGG GTGCACCTGT TCGCTCGGGC GAGCGGACGT
CGTCTCGCCT GGCGGCCACC GGATCCCCGG GAATCCCTGA CCATCCCCGT GCCCGGCGCG
CTCGCCGCGT CCCCATCCCC CGCTTCGCCC GCGCCCGCCG CGGTCTGA
 
Protein sequence
MAEIRIEGLT RRFGNVRAVD DVSLDVADGD FLVLLGPSGC GKTTLLRMIA GLLEPSEGRI 
MLGDRDITHV PARRRDLAMV FQSYALYPHL TVERNIGFPL RAARRPKAEI ARRVREVADQ
LELGGLLHRR PRELSGGQRQ RVALGRALVR DPQAFLMDEP LSNLDAKLRT ATRTELAGLH
RRLGRTFIYV THDQVEAMSM ATRVVLLNGG RVEQVGSPTE VYDTPASVFV AGFLGAPPMN
LIEARVEADG DLLAVRADGL RIPLWPGFDE PRDVIVGLRP ENLTLLPGSA ESPRPAEPPH
PAEASTASPG LTASPGSTAQ IEGVVTTVEN LGSEEVAWCD VHGQAVALRG PRPIGLAAGD
RARLTVDVSR VHLFARASGR RLAWRPPDPR ESLTIPVPGA LAASPSPASP APAAV