Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2833 |
Symbol | |
ID | 3904745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3336743 |
End bp | 3337990 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880154 |
Product | ABC transporter related |
Protein accession | YP_481920 |
Protein GI | 86741520 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGAAA TCCGGATCGA GGGCCTCACG AGGCGCTTCG GAAACGTCCG TGCGGTGGAC GACGTCTCCC TCGACGTGGC GGACGGCGAC TTCCTCGTTC TGCTGGGACC GAGCGGCTGC GGGAAGACCA CGCTGCTGCG CATGATCGCC GGCCTGCTGG AGCCGAGCGA GGGACGCATC ATGCTCGGCG ATCGCGACAT CACCCATGTC CCCGCCCGAC GGCGCGACCT CGCCATGGTC TTCCAGAGCT ACGCGCTGTA CCCGCACCTG ACGGTCGAAC GCAACATCGG GTTTCCGCTG CGGGCCGCGC GCCGCCCCAA GGCGGAGATC GCCCGGCGCG TCCGCGAGGT CGCCGACCAG CTCGAACTCG GCGGGCTGCT CCACCGGCGC CCCCGTGAGC TGTCCGGCGG GCAGCGCCAA CGGGTGGCGC TCGGCCGTGC GCTGGTCCGT GACCCCCAGG CGTTCCTCAT GGACGAACCC CTCTCGAACC TCGACGCGAA ACTGCGCACC GCGACCCGCA CCGAGCTCGC CGGACTGCAC CGCCGGCTGG GCCGGACCTT CATCTACGTC ACCCACGACC AGGTGGAGGC CATGTCGATG GCAACCCGCG TGGTCCTGCT CAACGGCGGC CGCGTGGAAC AGGTGGGCAG CCCGACCGAG GTCTACGACA CGCCGGCCTC GGTGTTCGTC GCCGGCTTCC TCGGCGCACC GCCGATGAAC CTGATCGAGG CCCGGGTGGA GGCCGACGGC GACCTGCTGG CGGTCCGCGC GGACGGGCTG CGCATCCCGC TGTGGCCGGG CTTCGACGAA CCCCGCGACG TCATCGTCGG TCTGCGACCC GAGAACCTGA CGCTGTTGCC CGGCTCGGCC GAGTCGCCCC GCCCGGCCGA GCCGCCCCAC CCGGCCGAGG CATCGACGGC ATCACCCGGC TTGACGGCAT CACCCGGGTC GACCGCGCAG ATCGAAGGTG TCGTGACCAC GGTCGAGAAC CTCGGCAGCG AGGAGGTGGC CTGGTGCGAC GTCCACGGTC AGGCCGTCGC GCTGCGTGGC CCCCGCCCGA TCGGACTGGC CGCCGGTGAC CGGGCCCGAC TCACTGTCGA CGTCTCACGG GTGCACCTGT TCGCTCGGGC GAGCGGACGT CGTCTCGCCT GGCGGCCACC GGATCCCCGG GAATCCCTGA CCATCCCCGT GCCCGGCGCG CTCGCCGCGT CCCCATCCCC CGCTTCGCCC GCGCCCGCCG CGGTCTGA
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Protein sequence | MAEIRIEGLT RRFGNVRAVD DVSLDVADGD FLVLLGPSGC GKTTLLRMIA GLLEPSEGRI MLGDRDITHV PARRRDLAMV FQSYALYPHL TVERNIGFPL RAARRPKAEI ARRVREVADQ LELGGLLHRR PRELSGGQRQ RVALGRALVR DPQAFLMDEP LSNLDAKLRT ATRTELAGLH RRLGRTFIYV THDQVEAMSM ATRVVLLNGG RVEQVGSPTE VYDTPASVFV AGFLGAPPMN LIEARVEADG DLLAVRADGL RIPLWPGFDE PRDVIVGLRP ENLTLLPGSA ESPRPAEPPH PAEASTASPG LTASPGSTAQ IEGVVTTVEN LGSEEVAWCD VHGQAVALRG PRPIGLAAGD RARLTVDVSR VHLFARASGR RLAWRPPDPR ESLTIPVPGA LAASPSPASP APAAV
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