| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2822 |
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| Symbol | |
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| ID | 3904734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3321569 |
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| End bp | 3323335 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880143 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_481909 |
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| Protein GI | 86741509 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACGGG ACGAAGCAGA GCGCGTGGCG ACCGGACCGG TGACGGTTCC GGTCGCGCGT
AACGAACCGA CCCGTTCCTA CGCCCCGGGT AGCCCGGAAC GTGCCAGTCT GCGGCGGGCC
CTGCTCCGGC TGGGCGGTGA GCACATCGAG CTGACTAACA CGATCGGGGG ACACCAGCAT
CTCGGCGGCG GCCCGGCCCG CGACGTCGTG CAGCCTCATG CATACCGGCG GGTGCTCGGA
ACGCTGCGAG AGAGCACCCA CGCGGACGCG GCCGCGGCGG TCGCCGCGGC GAAGAAGGCC
GCCCCCGGCT GGCGGGATCT GGGTTTCGCG GGACGGGCCG CGGTGCTCCT GCGCGCCGCG
GAGGCGCTCG CCGGCCCGTG GCGGGACACG CTGAACGCGG CCACCATGCT GGGCCAGTCG
AAGACCTGCC AACAGGCGGA GATCGACGCC GCCTGCGAGC TGATCGACTT CTGGCGGTTC
AACGTGATGT TCGCCGCCGA GTTGCTGGCC GACGTGCCGG CCAGCGGGAT CGGGGAATGG
AACCGGCTGG ATCTGCGTCC ACTGGAGGGA TTCGTCTACG CGGTCAGTCC GTTCAACTTC
ACCGCCATCG CCGGGAACCT GGCGACCGCG CCGGCGTTGA TGGGGAACAC TGTCGTCTGG
AAGCCGGCTC CCACGCAGGC GTTCGCCGCA CATTTCCTGA TGCGGCTGCT GGAATCGGCG
GGGTTGCCGC CCGGCGTCAT CAACCTCGTC GGCGGTTCGG GTGAACCGGT CAGCGACGTG
GTGTTCTCCG ACCCGGATCT GGCCGGCGTT CATTTCACCG GTTCTCCCGC CGTCTTCGCC
CGGCTGTGGC GGGCGGTCGG CGAGAATCTG GACGGCTACC GTTCCTATCC GCGGATCGTC
GGGGAGACCG GTGGCAAGGA CTTCGTGGTG GCGCATCCCT CGGCCGACGT CGACGTGCTG
CGTACCGCGC TGCTGCGGGG GTCCTTCGAG TACAGCGGCC AGAAATGCTC GGCGGCCTCC
CGGGCGTACC TGCCCGCAAG CCTGTGGCGG CGCCTGGACG CCGAACTCGC CGCCGCGACC
GAGGCACTGT CGGTGGGGGA CGTCAGCGAC TTCGACCATT TCACCGGTGC GGTCATCGAC
GCGCGCGCCT ACGATCGCCT GGCCGCCGCG TGCACCCGCG CTGCCAGCGA TTCGACCGTC
ACCGTTCTCG CCGGGGCACA GTGCGATGAC GCTGTCGGCT GGTTCGTCCG GCCGACGGTG
CTGCTCGGCA CCGATCCCGG GCGGGAGTGG TTCACCCGCG AGCTGTTCGG CCCGATCCTG
TCGGTTCACG TCTACGACGA CAACCGGCCA GGTGCCTGGG ACGACGTGCT GACACTGATC
GATCGGACCT CGTCCTACGC GCTCACCGGT GCCGTCGTCG CGACCGACCG CTCGGCGATC
GCTCGCGCCG AACACGTGCT GCGCTTCGCG GCCGGCAACT TCTACGTCAA TGACAAGCCG
ACCGGGGCCG TGGTCGGCAG GCAGCCGTTC GGCGGCGCTC GCCGTTCCGG TACCAACGAC
AAGGCCGGTT CCGCGCAGAA CCTGCTGCGC TGGGTCAGCC CACGGGTGAT CAAGGAGAAT
CTCGCTCCGC CTGCCGACCA CGTGTATCCC CACATGGGGC CCGGGGCCTT TGGCGCGTCC
GGCGGTGGCG CGTCCGGCGG CGGTGGCGTG GGTGGGCTGC CGGACGACTC CGCCGGGGGT
CCCCCGGCCC CTGACCGTGC CCCCTGA
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| Protein sequence | MRRDEAERVA TGPVTVPVAR NEPTRSYAPG SPERASLRRA LLRLGGEHIE LTNTIGGHQH
LGGGPARDVV QPHAYRRVLG TLRESTHADA AAAVAAAKKA APGWRDLGFA GRAAVLLRAA
EALAGPWRDT LNAATMLGQS KTCQQAEIDA ACELIDFWRF NVMFAAELLA DVPASGIGEW
NRLDLRPLEG FVYAVSPFNF TAIAGNLATA PALMGNTVVW KPAPTQAFAA HFLMRLLESA
GLPPGVINLV GGSGEPVSDV VFSDPDLAGV HFTGSPAVFA RLWRAVGENL DGYRSYPRIV
GETGGKDFVV AHPSADVDVL RTALLRGSFE YSGQKCSAAS RAYLPASLWR RLDAELAAAT
EALSVGDVSD FDHFTGAVID ARAYDRLAAA CTRAASDSTV TVLAGAQCDD AVGWFVRPTV
LLGTDPGREW FTRELFGPIL SVHVYDDNRP GAWDDVLTLI DRTSSYALTG AVVATDRSAI
ARAEHVLRFA AGNFYVNDKP TGAVVGRQPF GGARRSGTND KAGSAQNLLR WVSPRVIKEN
LAPPADHVYP HMGPGAFGAS GGGASGGGGV GGLPDDSAGG PPAPDRAP
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