| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2819 |
|---|
| Symbol | |
|---|
| ID | 3904731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3319777 |
|---|
| End bp | 3320469 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637880140 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_481906 |
|---|
| Protein GI | 86741506 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2013] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCCA TGAGCCAGCC ACTCGCCACC TTCGCGGGGG GCCCCGCCGC GGGCCCCCCG
TTCGCCCTGG AAGAGGGCGA TCGCATGCTG CGGGTACGCC TCGACGGCGG CGAGATGTAC
GCCAAGCAGG GATCCATGGT GGCCTATCGC GGCCGCGTCG ACTTCGCCTA CAAGGGCCAG
GGAGTCGGTG GATTCCTGCG GCGGGCGGTG ACTGGTGAGG GCCAGGACCT GATGAGGGTG
GCCGGCCACG GAACCGTCTG GTTCGCCGAG TCCGGAAGCC ACATCTCGGT CTTCACGCTC
GACAACGACA GCCTGACGGT CAACGGCCGC AGTCTGCTCG CGCTGGAGTC CGGCATCCGC
TACAAGGTCA CCACGACGTC CGGCGGCATC GGCGCCATGA TCGCCGGTGG GATCTTCAAC
ACCGAGGTTT CCGGCAGCGG CGGCGTCGCC GTGCTGTGCC TGGGCGCTCC CCTGGTGTTG
TCGACGGACG AGCCGGTCTG CGTCGACCGG GATGCCGCGG TCGCCTGGAC GGCGGGCGTG
CGTACCCGGG TGGTCTCCTC GTTCAAGATA GGCAACCTCG TGGGGCGTAG TTCGGGGGAG
CTCGCGCAGA TCGAGTACTC CGGTCGGGGG GGATTCGTCG TCGTCCAATG TGGTGAGACG
CCGGCCGCCG GGACCGGCAC CGACCGGCAC TGA
|
|---|
| Protein sequence | MEAMSQPLAT FAGGPAAGPP FALEEGDRML RVRLDGGEMY AKQGSMVAYR GRVDFAYKGQ
GVGGFLRRAV TGEGQDLMRV AGHGTVWFAE SGSHISVFTL DNDSLTVNGR SLLALESGIR
YKVTTTSGGI GAMIAGGIFN TEVSGSGGVA VLCLGAPLVL STDEPVCVDR DAAVAWTAGV
RTRVVSSFKI GNLVGRSSGE LAQIEYSGRG GFVVVQCGET PAAGTGTDRH
|
|---|
| |