Gene Francci3_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2814 
Symbol 
ID3904960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3314006 
End bp3315682 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content73% 
IMG OID637880135 
Producthypothetical protein 
Protein accessionYP_481901 
Protein GI86741501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.856062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCG TACGCTTAGT TGCTGTGACG GCTGTAACGT CGCTGCCGCC CACGCAGAGT 
GGGGGAGCCT CCCCGGCCGG TCGCCGAGCG ACCGCGCGTC GTCGCCGTGG CGGTGGGGAG
CCCGGTGGCC CGGGCGGCCC GCGAGCGCGG TGGGGCACGC GGCTCGCGCG GGCCGTGCTG
GGCATCGCGG CGCGATGCGA CGCGGGTGTC CGGCTCGTCG GGCTGCTGGC GTTTCTCGTG
GTCGCGCTCG CGTTGTTCGG GTTGACGCTG CACGGAGTGG TCACTCATCG GCTGGACGCG
ACCGACGGCC TGGTGAGTCG GCACGGCCGA GCGCTCGCCA CGGCTCAGGA GCTGCGGGCC
GCCCTCTCCC AGGCGGATGC CGCCGCGGCG GCGGAGGTCT TCGCGCCCGT CGAGCTTCTC
GTCGGCAGGG GAGAGTCCGC CGCCGAGCTG CGGCAGCGCT ATGATCGGAT CAAGAACGGT
GGGCTGTTCG AGGCGAGTGT CGCCGATGCC GCCCGTGACG TCCTGGACCT GCGCCGACTA
GACCCGGCCC TGTGCGCCGC GGACCCGCCC TGGTCCGACC CCGCGGCGCC GCCACCCGGA
CCCGACGGCG CAGGGACCCG GCCGTCGTCC GGGCGGATCG CCTCGTCGTG CCCCCTGGAC
GTGCTTGCCG GCGGCATTCC CGTCTACAAC GGGATGGTCG AACGGGCCCG GGCGAACAAC
CGGGCGGGGC TGTCCGTCGG CGAGGCCAAC CTGCGGGCCG CCTCGACGAT GATGCGCACG
GAGATCCTTC CGGCGACCGA GGTGCTCGTC GCCCGGTACG CCGACGCGGT GGACACCGCC
TACCAGCAGG CCACCGGCTC ACGGGGGGAA TGGGCGATCG TGATCACGGC CGCCCTCGCG
ATCATCGCGC TCGTCGGCGT CCAGCTGCTT CTGGTCCGAC GCACGAACCG ACTGGTCAAC
CCGGGCCTGC TGCTCGGCAC CGGGTGCATC CTGGCCACGG TCACCTGGAC CGCGGTCGCC
TTCGGGACCC AGCAGACCCG TCTTGACACC GCGCAGGACT CCGGGTATCG ACCGATGAGC
CTGCTCGCCC GATCGAAGAC CCTGGCTCTG GAGGCACGGG TCGATGAGAA CCTCTCGCTG
ACGGCGCTCG GCAACGGCAC CCGTTTCGAC GAGCACTTCG CCTGGGTGAC CCGAGGCCTC
GGCTTCGACG TGACCGGTGA CCGCCTACCG CCCGAACCGG TCACCCGTCG TGGTTCACTC
GTCGTCGCCC TCGACGCGCG CGGGGGGGCC GGGATACCGG CGGGACTCGA GAGCGATCTG
CGCTCCTGGC TGCGTAGCCG GGCCTCGGTG GTGGCTCTGC TGGCCTCGTC ACCGGACTCG
GTCGTCGCGG CCGCGCGAGG ACCGGGAGAC GCCGGCTCCT CCGTCGGGGA CCCGCGTTCC
TCCGACACGT TCGGACAGGC GGTGACCCGG ACCCTCGGGC CGGGCACGAC GGCGTTCACC
AGCTTCCTCG GCAAGCTCGA CGTCGCGATC GACGCCGCCC GGGGCAGGTT CGAAGGAGAT
GTCCGCCGGG CCGCCGCGGC GTTGCGCGAT CTCGAGCTGG CCGGCCCGGC GCTTGTCCTC
ACCGCGATCG TCGCGGCCGC GGCGGGGATG TGGCCCCGGC TCCGGGAGTA CCTGTGA
 
Protein sequence
MKRVRLVAVT AVTSLPPTQS GGASPAGRRA TARRRRGGGE PGGPGGPRAR WGTRLARAVL 
GIAARCDAGV RLVGLLAFLV VALALFGLTL HGVVTHRLDA TDGLVSRHGR ALATAQELRA
ALSQADAAAA AEVFAPVELL VGRGESAAEL RQRYDRIKNG GLFEASVADA ARDVLDLRRL
DPALCAADPP WSDPAAPPPG PDGAGTRPSS GRIASSCPLD VLAGGIPVYN GMVERARANN
RAGLSVGEAN LRAASTMMRT EILPATEVLV ARYADAVDTA YQQATGSRGE WAIVITAALA
IIALVGVQLL LVRRTNRLVN PGLLLGTGCI LATVTWTAVA FGTQQTRLDT AQDSGYRPMS
LLARSKTLAL EARVDENLSL TALGNGTRFD EHFAWVTRGL GFDVTGDRLP PEPVTRRGSL
VVALDARGGA GIPAGLESDL RSWLRSRASV VALLASSPDS VVAAARGPGD AGSSVGDPRS
SDTFGQAVTR TLGPGTTAFT SFLGKLDVAI DAARGRFEGD VRRAAAALRD LELAGPALVL
TAIVAAAAGM WPRLREYL