Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2814 |
Symbol | |
ID | 3904960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3314006 |
End bp | 3315682 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637880135 |
Product | hypothetical protein |
Protein accession | YP_481901 |
Protein GI | 86741501 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.856062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCGCG TACGCTTAGT TGCTGTGACG GCTGTAACGT CGCTGCCGCC CACGCAGAGT GGGGGAGCCT CCCCGGCCGG TCGCCGAGCG ACCGCGCGTC GTCGCCGTGG CGGTGGGGAG CCCGGTGGCC CGGGCGGCCC GCGAGCGCGG TGGGGCACGC GGCTCGCGCG GGCCGTGCTG GGCATCGCGG CGCGATGCGA CGCGGGTGTC CGGCTCGTCG GGCTGCTGGC GTTTCTCGTG GTCGCGCTCG CGTTGTTCGG GTTGACGCTG CACGGAGTGG TCACTCATCG GCTGGACGCG ACCGACGGCC TGGTGAGTCG GCACGGCCGA GCGCTCGCCA CGGCTCAGGA GCTGCGGGCC GCCCTCTCCC AGGCGGATGC CGCCGCGGCG GCGGAGGTCT TCGCGCCCGT CGAGCTTCTC GTCGGCAGGG GAGAGTCCGC CGCCGAGCTG CGGCAGCGCT ATGATCGGAT CAAGAACGGT GGGCTGTTCG AGGCGAGTGT CGCCGATGCC GCCCGTGACG TCCTGGACCT GCGCCGACTA GACCCGGCCC TGTGCGCCGC GGACCCGCCC TGGTCCGACC CCGCGGCGCC GCCACCCGGA CCCGACGGCG CAGGGACCCG GCCGTCGTCC GGGCGGATCG CCTCGTCGTG CCCCCTGGAC GTGCTTGCCG GCGGCATTCC CGTCTACAAC GGGATGGTCG AACGGGCCCG GGCGAACAAC CGGGCGGGGC TGTCCGTCGG CGAGGCCAAC CTGCGGGCCG CCTCGACGAT GATGCGCACG GAGATCCTTC CGGCGACCGA GGTGCTCGTC GCCCGGTACG CCGACGCGGT GGACACCGCC TACCAGCAGG CCACCGGCTC ACGGGGGGAA TGGGCGATCG TGATCACGGC CGCCCTCGCG ATCATCGCGC TCGTCGGCGT CCAGCTGCTT CTGGTCCGAC GCACGAACCG ACTGGTCAAC CCGGGCCTGC TGCTCGGCAC CGGGTGCATC CTGGCCACGG TCACCTGGAC CGCGGTCGCC TTCGGGACCC AGCAGACCCG TCTTGACACC GCGCAGGACT CCGGGTATCG ACCGATGAGC CTGCTCGCCC GATCGAAGAC CCTGGCTCTG GAGGCACGGG TCGATGAGAA CCTCTCGCTG ACGGCGCTCG GCAACGGCAC CCGTTTCGAC GAGCACTTCG CCTGGGTGAC CCGAGGCCTC GGCTTCGACG TGACCGGTGA CCGCCTACCG CCCGAACCGG TCACCCGTCG TGGTTCACTC GTCGTCGCCC TCGACGCGCG CGGGGGGGCC GGGATACCGG CGGGACTCGA GAGCGATCTG CGCTCCTGGC TGCGTAGCCG GGCCTCGGTG GTGGCTCTGC TGGCCTCGTC ACCGGACTCG GTCGTCGCGG CCGCGCGAGG ACCGGGAGAC GCCGGCTCCT CCGTCGGGGA CCCGCGTTCC TCCGACACGT TCGGACAGGC GGTGACCCGG ACCCTCGGGC CGGGCACGAC GGCGTTCACC AGCTTCCTCG GCAAGCTCGA CGTCGCGATC GACGCCGCCC GGGGCAGGTT CGAAGGAGAT GTCCGCCGGG CCGCCGCGGC GTTGCGCGAT CTCGAGCTGG CCGGCCCGGC GCTTGTCCTC ACCGCGATCG TCGCGGCCGC GGCGGGGATG TGGCCCCGGC TCCGGGAGTA CCTGTGA
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Protein sequence | MKRVRLVAVT AVTSLPPTQS GGASPAGRRA TARRRRGGGE PGGPGGPRAR WGTRLARAVL GIAARCDAGV RLVGLLAFLV VALALFGLTL HGVVTHRLDA TDGLVSRHGR ALATAQELRA ALSQADAAAA AEVFAPVELL VGRGESAAEL RQRYDRIKNG GLFEASVADA ARDVLDLRRL DPALCAADPP WSDPAAPPPG PDGAGTRPSS GRIASSCPLD VLAGGIPVYN GMVERARANN RAGLSVGEAN LRAASTMMRT EILPATEVLV ARYADAVDTA YQQATGSRGE WAIVITAALA IIALVGVQLL LVRRTNRLVN PGLLLGTGCI LATVTWTAVA FGTQQTRLDT AQDSGYRPMS LLARSKTLAL EARVDENLSL TALGNGTRFD EHFAWVTRGL GFDVTGDRLP PEPVTRRGSL VVALDARGGA GIPAGLESDL RSWLRSRASV VALLASSPDS VVAAARGPGD AGSSVGDPRS SDTFGQAVTR TLGPGTTAFT SFLGKLDVAI DAARGRFEGD VRRAAAALRD LELAGPALVL TAIVAAAAGM WPRLREYL
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