Gene Francci3_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2808 
Symbol 
ID3904954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3306877 
End bp3307593 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content71% 
IMG OID637880129 
Producthypothetical protein 
Protein accessionYP_481895 
Protein GI86741495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTG GGTTCGAGAT CCGCCGCGAG GGCGTGCTGC CCACCTCCCC GGAGGAGTAC 
TGGGACGCCG TGACCACCGG TAACGGCGGA TGGCTGTGGC CGATGGAGTT CGAGCCCCGC
CAGGGTGGCG CCGCGCCCTT CGGGGGCACG GTCACCGTCT GGGATCCGCC GCACCACCTC
GTCACCCGGG TGGAGGGTGC GGATGGCTGG TTCAACCAGC TGGAACATGT GATCGAGGGC
CGGGACGGCG GCACGACCTC CTTCCGCTAC GTCCACAGCG GGATCTTCGT CGACGACTGG
GAGAACCAGT ACGACGGCGC CAGCCAGCAC ACCGACTTCT ACCTGCACAC GCTCGGCCAG
TACCTGCGGT ACTTCAGTCG CCGGCCGGTG ACCTACGTCG CGGCCGACGC GCCGGCGTCC
TCGACCGCGC CGGACGCGTT CGTCCGGCTG CGCCGCGAGC TCGGCGTCGC CGACGAGGTC
GGCCAGGGCG ACGCGGTGCG CGTCACCCTC CCGGGCATCG ACCCGCTGGA CGCCGTGGTC
GACTACCTGC ATCCCCACTT CCTCGGCCTG CGGACCGGCG ACGGGCTGTA CCGCTTCTTC
GGCCGCAACG CCTTCGGCGC CCCGATCGGC ATCGCCCTGC ACCTGTTCGC CCCCGGCGCC
GACCAGGCGA AGACCACCCA GGCCTGGACC GACTGGCTAC AGGACGTGTT CGCCTAA
 
Protein sequence
MSRGFEIRRE GVLPTSPEEY WDAVTTGNGG WLWPMEFEPR QGGAAPFGGT VTVWDPPHHL 
VTRVEGADGW FNQLEHVIEG RDGGTTSFRY VHSGIFVDDW ENQYDGASQH TDFYLHTLGQ
YLRYFSRRPV TYVAADAPAS STAPDAFVRL RRELGVADEV GQGDAVRVTL PGIDPLDAVV
DYLHPHFLGL RTGDGLYRFF GRNAFGAPIG IALHLFAPGA DQAKTTQAWT DWLQDVFA