Gene Francci3_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2804 
Symbol 
ID3904950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3302819 
End bp3303760 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content72% 
IMG OID637880125 
Productcitrate lyase 
Protein accessionYP_481891 
Protein GI86741491 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA CCGCGGCCGC GGGTTCCCCG GGTTCCCCGT CCGCGGGCCG CCCACCCGCC 
GCGTACCGTC CGCGGCGTTC CGTCCTCTAC ATGCCCGGGG CCAACGAGCG CGCCATGGAG
AAGGCCAGGA ATCTGCCGGC CGACGCGCTC ATCCTGGACC TCGAGGACGC GGTGGCGCCC
GTCGCCAAGG AGCGCGCCCG GGAGCAGGTC TGCGCGGCGG TGGCCGATGC CGCCTACGGC
CACCGGGAGG TCACGGTTCG CGTCAACGCC CGCGGCAGCT CCTGGCATGC CGACGACCTG
CGCGCCGCGG GACGGGTGGG CCCGGACGCC GTCGTGGTGC CGAAGGTCGA GTCGCCGTCG
GACGTCCACG CGATCGAAAA AGGGCTCGAA GCGGCCGGCG CGCCGGACCG CACCATGATA
TGGGCGATGG TGGAGACACC TGGTGCCATC CTGCGCGCCC AGGAGATCGC CCAGGCGTCG
CCGCGGCTCA CCGTCCTCGT GATGGGCACC AACGACCTGG CCAACGAGCT GCGTGCCGAA
TTCGTGCCCG GCCGCGCCCC GCTGCTGACC GGCCTGGGGC TGTGTCTGCT GGCCGCGCGC
GCGAGTGGAA CCGTGATCCT CGACGGTGTC TACAACGACA TCCGCGACGC CGACGGCTTC
GCGGCGGAAT GCCGCCAGGG CCGCGAGATG GGCTTCGACG GTAAGACGCT TATCCACCCC
AACCAGATCG AGACGTGTAA CCGCACGTTC TCACCCACTG AGGCCCAGGT CGCGCAGGCC
GCGGAGATCG TGCGGGTCTG GGAGGAGGCG CTACGCGAGG GCCGCGGAGT GGCGACCGTC
GACGGCCGGC TGATCGAGAA CCTGCACGTC GACAACGCGC GCCGGATTCT CGCCGTCAGC
GCGGCCATCG CGGGTCTGGC CGACGGCCAG GCGGCCTCCT GA
 
Protein sequence
MTGTAAAGSP GSPSAGRPPA AYRPRRSVLY MPGANERAME KARNLPADAL ILDLEDAVAP 
VAKERAREQV CAAVADAAYG HREVTVRVNA RGSSWHADDL RAAGRVGPDA VVVPKVESPS
DVHAIEKGLE AAGAPDRTMI WAMVETPGAI LRAQEIAQAS PRLTVLVMGT NDLANELRAE
FVPGRAPLLT GLGLCLLAAR ASGTVILDGV YNDIRDADGF AAECRQGREM GFDGKTLIHP
NQIETCNRTF SPTEAQVAQA AEIVRVWEEA LREGRGVATV DGRLIENLHV DNARRILAVS
AAIAGLADGQ AAS