| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2781 |
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| Symbol | |
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| ID | 3904927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3275268 |
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| End bp | 3275693 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637880103 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_481869 |
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| Protein GI | 86741469 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTGACCA GGATCGACCA CGTCGGGATC GCGGTGGCTT CCCTCACCGA GGCCATCCCC
CGCTATGAGG AGGCATTCGG TCTGGAGGTC GTGCACCAGG AGGAGAACGA GCGCCAAGGG
GTGCGCGAAG CGATGCTGCT GGTCCACAGC GGCAAGACCG GGAACTCCTA CGTCCAGCTG
CTGGAACCGC TGCGCGAGGA CAGCCCGATC GGGAAGTTCC TGGCCAAGCG GGGGCCGGGC
ATCCACCACA TCGCCTACGG CGTCGCCGAC ATCGACAGCG CCCTGGCGAC CCTGACCATG
ACCGGATTCG ATCTGGTCAA CAAGACTCCG GTGCACGGCA CCGCCGGCAG CCGGATCGCG
TTCATCCATC CCAAGGGCCT CGGAGGCGTG CTCACCGAAC TCGTCGAGGC CGCCGAGGGG
CACTGA
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| Protein sequence | MLTRIDHVGI AVASLTEAIP RYEEAFGLEV VHQEENERQG VREAMLLVHS GKTGNSYVQL
LEPLREDSPI GKFLAKRGPG IHHIAYGVAD IDSALATLTM TGFDLVNKTP VHGTAGSRIA
FIHPKGLGGV LTELVEAAEG H
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