Gene Francci3_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2780 
Symbol 
ID3904926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3274433 
End bp3274867 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID637880102 
ProductMerR family transcriptional regulator 
Protein accessionYP_481868 
Protein GI86741468 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.891963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACGA CGCGTCGCGA TCGTTCCGCG TTCCGCGCGG CCCGCGGAAA CACCCGTCAG 
ATAGGTGAGG TTGCCGAGCG GGTCGGGCTT TCGCTGCGCG CGGTCCGGTA CTACGAGGAA
GCCGGACTGC TTACTCCCGC CGGACGTACG CCGGGTGGCT TCCGTCTGTA CGACGACGAG
GCCGTCGATC GGCTGCTGGT CATCAAGAAG ATGAAGTCGC TGGGGTTCAC GTTGGAGGAG
ATGCGGTCGC TGTTGTCGGT GCGCGACGAG CTGTCGGATT CGACGATCTC CGAGAGTCGG
CGGACCGAAC TGCGCGAGCG GCTGCATACC TGGGTCGTGC TGGCTGAGGA GAAGCTGGCC
ACCCTGCGGC AGCAGGCGGG AGTCGCGGAG GACTTCGTCA TCGGCCTGCA CGGTGATGCG
GATCGGACGG TATGA
 
Protein sequence
MSTTRRDRSA FRAARGNTRQ IGEVAERVGL SLRAVRYYEE AGLLTPAGRT PGGFRLYDDE 
AVDRLLVIKK MKSLGFTLEE MRSLLSVRDE LSDSTISESR RTELRERLHT WVVLAEEKLA
TLRQQAGVAE DFVIGLHGDA DRTV