Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2775 |
Symbol | |
ID | 3906486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3271438 |
End bp | 3272508 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880098 |
Product | transposase, IS605 OrfB |
Protein accession | YP_481864 |
Protein GI | 86741464 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.525112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGAAG GAGGCGTTCC GCGCTGGCCT GGATCAGCTT GCCCGGGGGT TGAAGAACTT CACCGACTCC CGGTAAGGGA AGCGGAAGGG CCGGCGGGTC GGTTTCCCCG GTTCAAGAAG CGCGGGAGGG CCCGTGACTC GTTCCGGTAC ACCACCGGCG CCTACGGTCC GGCTGGGGAT CGGCAGGTGA AGCTGCCCCG GGTCGGCCGG GTCAAGGTGC ATGAGCCGAT GGGTGCGCTG ACCGGCCGGC TCGTCGACGG GTCCGCACGC CTGCTGGGCG CGACCGTGTC CCGGACCGCG GGGCGCTGGT TCGTGGCGTT CACCGTGGAG GCCGACCGTG ATGTCCCCGG CAAGCCGTCT ACCCGGCAGC GCCGGGGCGG CCCGGTCGGG GTCGACCTGG GTGTGAGGCA CCTCGCCGTC CTGTCGACCG GCGAGACCGT CGAGAACCCC AGGCCGCTGG CCCGGTCGCT GCGCGAACTG CGCCGCGCGT CGCGGGCCTA CGCCCGCTCC ACGCCCGGCA GCGCCGGTCG CCGTAGACAC GCCGCCACCC TCGGTCGCCT CCATGCCCGC GTCGCCTACC AGCGCCGCGA CGGGCTGCAC AAGCTCACCG CCCGGCTGGC CAAGACCCAC GACACGATCG TGGTGGAAGA CCTGCACGTG GCCGGGATGG TCCGTAACCG CCGTCTTGCC CGTGCCGTGT CCGATACCGG GATGGCCGAG GTCCGCCGCC AGCTCGCCTA CAAGACCCTC TGGTACGGAT CGACGCTCGT GGTCGCGGAC CGCTGGTATC CAAGCTCGAA GACCTGTTCC GACTGCGGCT GGCGAAACCC AGGCCTCACC CTGTCGGACC GTATCTTCGC CTGCCAGTCC TGCGGGCTGG TAGGCGGCCG CGACCTGAAC GCCGCGGTCA ACCTGTCCAA CCTCGTCGCC GCCAGTAGGT CGGAGACGGT AAACGCCCGT GGAGCCGACC GTAGGACCCC GTCCGCGGGG CGGGCGGCTG GGAAACGGGA ACCCGGCACG GCTCGGGCCG GTCGGACCGG GAGTGCTTCA CCGCAAGGTG AGGCGGCATG A
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Protein sequence | MLEGGVPRWP GSACPGVEEL HRLPVREAEG PAGRFPRFKK RGRARDSFRY TTGAYGPAGD RQVKLPRVGR VKVHEPMGAL TGRLVDGSAR LLGATVSRTA GRWFVAFTVE ADRDVPGKPS TRQRRGGPVG VDLGVRHLAV LSTGETVENP RPLARSLREL RRASRAYARS TPGSAGRRRH AATLGRLHAR VAYQRRDGLH KLTARLAKTH DTIVVEDLHV AGMVRNRRLA RAVSDTGMAE VRRQLAYKTL WYGSTLVVAD RWYPSSKTCS DCGWRNPGLT LSDRIFACQS CGLVGGRDLN AAVNLSNLVA ASRSETVNAR GADRRTPSAG RAAGKREPGT ARAGRTGSAS PQGEAA
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