Gene Francci3_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2762 
Symbol 
ID3906473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3255174 
End bp3256040 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID637880085 
Productputative methyltransferase 
Protein accessionYP_481851 
Protein GI86741451 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.778358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTA CAACGGAATT CGATGCGGCT TTGGCGCCGG CGCGAGACGT GATCGCTGCA 
CAGCGTTCCG AGCCCGACAC GTCGGTCGGA TACGTCCAGG GCATCCTCAG CCACGACATC
TCCACGGAAC TCGGTCGGCT GCAACTGCTG GAATCACAGG TGGACCCGGC CACGCACGCC
GTTCTCGAGG CGCGGGGAAT CGCAGACGGA GGGCGGTTCC TGGAAATCGG TGCCGGTGCG
GGTTCGGTCG CCTACTGGCT GGCCGACCGG TTCCCCGGCG GGGAGGTGAC CGCAGTCGAC
GTGAGCACGA GTTTCCTCGA CGACACCGGC CGGTCGAACC TGCGGATCGT CCAAGCGGAC
GTGCGCACCC ACGACTTCGA GCCGGGCTCC TTCGACCTCA TCCATGCCCG CACCGTCCTC
ATGCACATCC CCGAACGTGA GGAGGTGCTG CGGCGGCTAG TCTCCTGGCT GGCCCCGGGC
GGCTGGCTGG TCACTGAGGA TCTCGTGCTG TCCCCGGTTG ACTCGTCACC GCACGACGAA
TTCCGGCACG CCTTCGAGGC GATCGGCCAG GCAATGGCGT CGTCGATCGG GTCGGACCTG
TGGTGGGGGC GAACGCTGCC GGCGCCGCTG ACCCGAGCGG GCCTGGTCGA CGCCGGTCTG
CACGCCACGT ACTACCCGGT TGGCGGCTCC AACGAGATCG GGCGCCTGTG GCGTGCGACG
TTCAGCCAGT CCGCCGACTA CCTTGTCGCC AGCGGCCTGC TCACCCGCGC CGATCTCGAC
TCGGCCCTGG CCCTGCTCGC CGATCCCGAC TTCCTCGACC TCGGGCCCAG CATCATCGCG
GCCTGGGGCC GGCGCCCCCC GGCCTGA
 
Protein sequence
MTSTTEFDAA LAPARDVIAA QRSEPDTSVG YVQGILSHDI STELGRLQLL ESQVDPATHA 
VLEARGIADG GRFLEIGAGA GSVAYWLADR FPGGEVTAVD VSTSFLDDTG RSNLRIVQAD
VRTHDFEPGS FDLIHARTVL MHIPEREEVL RRLVSWLAPG GWLVTEDLVL SPVDSSPHDE
FRHAFEAIGQ AMASSIGSDL WWGRTLPAPL TRAGLVDAGL HATYYPVGGS NEIGRLWRAT
FSQSADYLVA SGLLTRADLD SALALLADPD FLDLGPSIIA AWGRRPPA