Gene Francci3_2761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2761 
Symbol 
ID3906472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3253974 
End bp3255035 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID637880084 
Productluciferase-like 
Protein accessionYP_481850 
Protein GI86741450 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACTC CGCGCTTCGG TGTCACCCTT CCTCTGCCCG GCATCCCGCT GCGGGACCAT 
CGACGCATCG TCACGGGACT CGCTGACGCT GGCTACAGCG ACGTGTGGAC GGCCGAAGGC
GGCGGCATCG ACGCGTTCAC CCCGCTCGCG GTCGCCGCCG CCTGGGATCC CCGGGTGCGC
CTGGCGAGCG CGATCGTGCC CGTCCACACC CGCGGCCCGG CGGTGCTCGC CCAGACCGCG
GCGACCCTGG CCGATCTGAC GTTCGGCGGG CTTGTCCTTG GCATCGGTTC GTCGGTGCCC
GCCCACGTGA CCGACCTCAA CGGCATCCCG TTCGACGAGC CCTTCCGCCG GACCCGGGAC
ACGCTTCGTT TCCTCACCCG GGCGCTGCGC GGCGAGGTGG TCTCCGGCGC CTTCGACACG
TTCGCGATCC GCGGCTTCGC CATACCGAAT CCTCCGATCG AGACGCCGAA GGTCATCCTG
GGAGCGCTGC GGCCCGGCAT GCTCAAGCTC GGCTTCACCG AGGGGGATGG TGCCGTCACC
AATCTGTTGT CCCCCGAAGA TCTGATCAAG GTCCGCGCCG TCGTCGGACC GCAGCCAGCG
GGCAAGGAGC TGGTGGTGAA GGTCTTCGTG AGCCCGAACG CCGATCCGGA CGTCGCCCGC
CGCGACAGCC GGCCGTTCCT CACCTGGATC CTCAACCAGA CCCCCTACCA TGCCTTCCAC
GAATGGCTCG GCAACGGCGA ACGGCTCGCC GAGTCCCACG AGCGCTGGAC CGCCGGGGAC
CAGCGTGGTG CCGCCCGGGC ACTACCCGAT GAGGTCATTG ACGCCCTGTT CATCCACGGC
ACGCCCGAGC AGTGCCGCGA CCAGATCGCC GCATATGTGC AGCCCGGGGT TACCGCGATC
CAGCTCTACG TCCGCCTGAC TCCGTCCTTC CTGCTCGGCT CGTGGGACAC CGCCGGATCA
GCTGGATCGG CCGGCGGGGG AGAGCAGGAC CTGGCCGACC GGGTCCTCGG CCTGCTGAGC
ACGCTGCGCC CCCGCATCCC AACGCCGGCT GGCGTCGGCT GA
 
Protein sequence
MTTPRFGVTL PLPGIPLRDH RRIVTGLADA GYSDVWTAEG GGIDAFTPLA VAAAWDPRVR 
LASAIVPVHT RGPAVLAQTA ATLADLTFGG LVLGIGSSVP AHVTDLNGIP FDEPFRRTRD
TLRFLTRALR GEVVSGAFDT FAIRGFAIPN PPIETPKVIL GALRPGMLKL GFTEGDGAVT
NLLSPEDLIK VRAVVGPQPA GKELVVKVFV SPNADPDVAR RDSRPFLTWI LNQTPYHAFH
EWLGNGERLA ESHERWTAGD QRGAARALPD EVIDALFIHG TPEQCRDQIA AYVQPGVTAI
QLYVRLTPSF LLGSWDTAGS AGSAGGGEQD LADRVLGLLS TLRPRIPTPA GVG