Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2729 |
Symbol | |
ID | 3904719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3216956 |
End bp | 3220453 |
Gene Length | 3498 bp |
Protein Length | 1165 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880052 |
Product | helicase-like |
Protein accession | YP_481818 |
Protein GI | 86741418 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.36993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTTA GGTCTGAGAT GGGGACCGAA GAGGGCCGGC ACGGTGCCAC CGGGCCGGGA ATCGGTCGCC CGGCGTCCTG CCAGACTGGT CGGGCTGTTC ACCAAGGGGG GTATCAGGTG CCGAGTTCGA CGACCGAACG TGCTCCGTCA GCACGCCGCG TCCGCCAGCA GGCCATGGGC GGGACGGGGC CGGGCCCGGG GGCGCCGGCA TCTGACGAGC GTCCCGACAT CGGCGCGCTG GTGGAGGTCC GTGGTCAGAA GTGGGTGGTC GCGGACATCG ACGGACCGGC CGCCGGCGGG GCGAGGTGGA TCGCGGCGGA CGTGGGCGCG GCGGATAAGG CGGACGCGGC GGGGCCTGAC GCCGTCGGGG ACGGAGCGGC GCCGAGCACG AGCACGTTGG TCACCCTCCA GAGTGTGGAG GACGGTCGCT ACGGCCACAC CGTCGAGGTG ATCTGGGAGG TCGAGCCGGG CCGGCGGGTC CTGCCCAGCG GTTCGCTGCC CGACGTCACC CGGGGCGGCT TCGACCCACC GGGCCGGCTG GCCGCCTTCC TCGACGCGGT GCGCTGGTCG GCGGTGACCT CCGCGGACGC CCGGCGGCTG CAGGCCCCGT TCCGCTCGGG GGTGGCCGTC GAGGACTACC AGCTCGAGCC GGTGGCGCGC GCCCTTGCGG CGCCCCGGGT GAACCTCCTG CTCGCCGACG ATGTCGGCCT CGGTAAGACC ATCGAGGCCG GGCTGGTCGC CGAGGAGCTG CTGCTGCGGC ACCGGGCGCG CCGCATCATG ATCGTCTGTC CGGCCGGGCT CACCCTGAAA TGGCGCGACG AGATGGCCGA GAAGTTTGGC CGCGATTTCA CGATTATTGA CGCGGAGCGC TGCGCGGCGG TCCGTCGCTC GCACGGCAGC GCGGCGAACC CGTTCGAGGT CTACCCGCTG ACGATCGTCA GCCTGCCCTG GCTGCGTGGC CCGAAGGCGC AGCGGCTGCT CGACGAGGTG CTGCCCGGCG ATGGTCAGCC GACCTACCCG CGGACCTTCG ACCTGCTCAT TCTCGACGAG GCCCATCACA TCGCCCCGGC CGCGCCCAGG CAGGTCTACG CCGTCGACTC CCAGCAGACC AAGCTGATCC GCCGGCTCGC GCCGCACTTC ACCCACCGGC TGTTCCTGTC CGCCACCCCG CACAACGGCT ACCTCGCCTC GTTCACCGCG CTGCTGGAGA TCCTCGACGA CCAGCGGTTC GCCCGTGGCG TCGAGCCGGA CCGGATGGCC GTGGACGAGG TCGTGGTCCG CCGGTTGAAA AGCAGCATCG AGAACGCGGA CGGCACCCCG CGGTTCCCCC GGCGCCGCTC GATCGACATG CCGGTGGTCT ATCCGGACGG CGAACGGGAG ATCCACGGCC TGCTCAAGGA GTTTGCCGCA CTGCGCCGGG CCCGGCTGGA TTCGCCGCGC GGCCGCAAGG CGACCGACCT GGTGACCCTG CTGTTGAAGA AGCGGTTGTT CTCCTCCCCG GCGGCGTTCG GCCACACCGT GGGCGTCTAC CGGGAGACCC TCGTGTCCCG GCACGGGCGC CCGGTCCACG CGTCCCGCCT CGCGGATGAG GCCGAGCCGG GGATGCCTGG GCCGGGGATG CCCGAGCCGT GGATGGAGGA CTACTTCGAC GACGTCGCGA CCCTGGACGA CGAGCAGCTC GCCGACGCCG AGGACGACGC CCTCGGCCGG ATCGGGCCGA TGCAGCTCGA TCCCACCGAC GGCGAGATCG AGCTGCTGGA CCGGATGCGG CGCTGGGCGG ACGCCCACGA GGCCGAGCCG GACGCCAAGG CCCGCGCGCT GCTCGATTAT CTGAACGCGG TGTGCCGGCC GGACGGGCGG CACTGGTTCG ATGAGCGGGT CGTCGTGTTC ACCGAGTACC GCGACACGCA GATCTGGCTC GCCGGACTGC TGCGCCAGGA GGGGCTCGCC GGGGAGCGGC TCGGCCTGTT GCACGGCGGG CTGTCCGTTG ACGAGCGCGA GCAGCTGCGG CTCGCCTTCC AGGCCGAACC GAGCGAACAT CCGATGCGGG TCCTGCTCGC CACCGATGCG GCGAGTGAGG GCATCGACCT GCAGAATCAC TGCCATCGGC TGGTCAACTA CGACATCCCG TTCAACCCGA ACAAGCTGGA GCAGCGGATC GGCCGCATCG ACCGGTACGG GCAGCGCCGT TCCCCGGAGA TCCGGCACTT CGTCGGCTCC GGCTGGTCGG GCAGCGTCGA TTCCTTTGAG GCCGACCTGG AGTTCCTGTC GCGGGTGGTG AAGAAGGTCG CGCAGATGAA GGCCGACCTC GGGTCGGTCA ACGCGGTGCT CTCCGATCGG GTGCAGCGTC GGATGCTGGG GGAGCGGATC GACCTCGGTC CCGACGACCT CGACGTCGGT CCGGGCGGCT CCGTGGCCGC CGGAGGCACC GTCCCGGTCG CGGAGAACGT GCGCGAGCAG GTGCGCCGGC TGCGGGCGAA CCTCGACGAC ACGGTCCGCG AGCTCGGCAT CACCCCGGCG GCGGTGCGCC GCGTCGTCGG CACGGCACTG AGCCTCGCCC GCCAACAGGC ACTCACCCCG TACGTCGACG AGAAGGAGCA CGCCGAGGGA CTGTTCACGG TGCCGACGCT CACCGGCTCG TGGCAGCGCG CCTCCGCGGG ACTCACCGAG AAGCTGCGCC GTGAGGACCT TCCCCCGGGC ACGCCGCCGC GCCAGCGGCC GATCACCTTC GACTCGGCCA TGGCGAAGGA CCGCGACGAC GTCGTGCTCG CGCACCTCGG CCACCGCCTC GTCGACATGT CGACAAGGCT GCTGCGGGGC GCCGTCTCCA ACGCCGACGT CGGGCTGCAC CGCGTCACCG CCGTGCGCTC GGACGATCCG CGCTGCGAGG AGGTGCTGAT CGGCGCGTTC TCCCGGTTCG TGCTGGTGGG CGCGGACGGC GTCCGGCTGC ACGAGGAGGT CCTGTACGCG GGCGGCTGGG CGCCGGCGAC CGGGCGGTTC CGCCGCCTGG AGAACCTGAC GGTCCTCGGC GATCTCGTCG GTACCGCGCT CGCCGCCGGC CGGCCCGTCT CCGGGGAGAC GCGGGAGCGG CTCGCCGAGC GCTGGCCGGC GGTGCGGCCC GGGGTGCTCT CCGCCCTGGA GTGGCGGACG AGGACCCGCC AGGAGTCGCT GACCCGCCTT CTCGGCCAGC GCCGGGCCGC CGAGGAGAAT CGGATCACCA CTATCCTCGA TCAGTTCGCC GCGACGCTGC GCGGTGCGAT CGAGGATCCG GAGAACGACG AGGACGCCCT GTTCAGCCGG TTCGAGATCG CCAGGAGCCG CGAGGAGCTG GCCCAGTACC GCAAGGACCG GCAGGCGTGG CAGGACCGGC TCGACCGGCT CGACCAGGAA CGGCGACGGG AGCTCGACGT GATCGCGCAG CGATACCGTG ACCCGAGGCA GCACCAGTTC CCCGTCGCGG TCGTCCTGGT CGTGCCGGCA GCGGAGGAGG CGCGATGA
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Protein sequence | MSVRSEMGTE EGRHGATGPG IGRPASCQTG RAVHQGGYQV PSSTTERAPS ARRVRQQAMG GTGPGPGAPA SDERPDIGAL VEVRGQKWVV ADIDGPAAGG ARWIAADVGA ADKADAAGPD AVGDGAAPST STLVTLQSVE DGRYGHTVEV IWEVEPGRRV LPSGSLPDVT RGGFDPPGRL AAFLDAVRWS AVTSADARRL QAPFRSGVAV EDYQLEPVAR ALAAPRVNLL LADDVGLGKT IEAGLVAEEL LLRHRARRIM IVCPAGLTLK WRDEMAEKFG RDFTIIDAER CAAVRRSHGS AANPFEVYPL TIVSLPWLRG PKAQRLLDEV LPGDGQPTYP RTFDLLILDE AHHIAPAAPR QVYAVDSQQT KLIRRLAPHF THRLFLSATP HNGYLASFTA LLEILDDQRF ARGVEPDRMA VDEVVVRRLK SSIENADGTP RFPRRRSIDM PVVYPDGERE IHGLLKEFAA LRRARLDSPR GRKATDLVTL LLKKRLFSSP AAFGHTVGVY RETLVSRHGR PVHASRLADE AEPGMPGPGM PEPWMEDYFD DVATLDDEQL ADAEDDALGR IGPMQLDPTD GEIELLDRMR RWADAHEAEP DAKARALLDY LNAVCRPDGR HWFDERVVVF TEYRDTQIWL AGLLRQEGLA GERLGLLHGG LSVDEREQLR LAFQAEPSEH PMRVLLATDA ASEGIDLQNH CHRLVNYDIP FNPNKLEQRI GRIDRYGQRR SPEIRHFVGS GWSGSVDSFE ADLEFLSRVV KKVAQMKADL GSVNAVLSDR VQRRMLGERI DLGPDDLDVG PGGSVAAGGT VPVAENVREQ VRRLRANLDD TVRELGITPA AVRRVVGTAL SLARQQALTP YVDEKEHAEG LFTVPTLTGS WQRASAGLTE KLRREDLPPG TPPRQRPITF DSAMAKDRDD VVLAHLGHRL VDMSTRLLRG AVSNADVGLH RVTAVRSDDP RCEEVLIGAF SRFVLVGADG VRLHEEVLYA GGWAPATGRF RRLENLTVLG DLVGTALAAG RPVSGETRER LAERWPAVRP GVLSALEWRT RTRQESLTRL LGQRRAAEEN RITTILDQFA ATLRGAIEDP ENDEDALFSR FEIARSREEL AQYRKDRQAW QDRLDRLDQE RRRELDVIAQ RYRDPRQHQF PVAVVLVVPA AEEAR
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