Gene Francci3_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2721 
Symbol 
ID3904711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3206961 
End bp3208463 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content69% 
IMG OID637880044 
Productrecombinase 
Protein accessionYP_481810 
Protein GI86741410 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.79843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGCA CGATCGGGTA TCGGCGGATC TCCGATGACC GCGAAGGGCT GGAAGCCGGG 
GTCACTCGCC AGGATGAGGA CATCCGGGAG CATGCCGCCC GGCGGGACGA CATCGACCTG
ATCGACGTGC TGACCGACAA CGATCTGTCG GCCACGAAGG ACTACCGGCC GGAGTTCGAG
CGCATCCTGG TCATGGCTGC CGCTGGTGAG ATCGACGCGG TGATCTCGTG GACGTCGAAC
CGGTTCTTTC GATCGGCGAA GGACCGGGTT CGTGTCCTTG ACCTGTTCGA GGCCAAGGGA
ATTCGGATCA TCCCGGTGCG GGGTTCGGAG GCTGACCCGA CCACGGCGGA CGGCTATCTC
ATGGTCGATC TCATGGGAGC GATCGACCGG GCGGAGGCCA AGCGCACGGC GGAACGGGTA
TCCCGCGCGG CCAAGCAGCG GGCAGAGCAG GGCCGCCACC ATGGCGGGCG TAGGGCGTTC
GGCTATGGGC CGGTGGTGGC TACCGACCAT CTGGGCAGGC CCGTGCGGGA TTTTCACGCT
GTCATTCCGG AAGAGACGGC AACGATTCGC CGGATCGCCG CTGACATCCT CGCGGGCGTG
CCGTTGGGGA GCATCGCGCG CGCCCTCAAC GCGGCCGGGG TCCCGACCGT GACGAAGGCC
CACCGGGCGG CCTGCGTGAA CAACGTCAAG GGCCGTCGGG CGTGGGTGGA CTGTCCGTGT
CCGTACCGGG CGTGGGATGC CACCACTCTC AAGGAGTTGA TGGTCAATCC GCGTCTGATC
GGGATGCGTG GCTATCAGAC GAGGAGGTCG CGGCGCAGCA CGGGCGCCAT CGCGGTCATG
GGTGAGGCGC AGTGGCCGGC GATCCTGGAT GTCGAGACGT GGGAGCAGGT CCGGGCGATC
CTGACCGACG CGGCGCGGCG GACCAACACC GACGCGGAGA GGGTCCGGCG GGTGCTGGCC
GGGTTCGTCT ACTGCGCGTC GTGCGGGCAC AAGCTGACCG GGAACGGCGC GACCGGCACG
CGGCTGTACT GCCAGCGCCG CGACGGCCGG TGTGCGGCCA AGGTCCGGAT CGGGGAGAGC
TTCCTGGTCG GCCTGGTGGG CCTGGCCGTG CGGGAGCGCC TTGACGTGCT GGTTCTCCAG
CCTGCCGCGA CGGCGGACCC GGTGGCCGCT GAGCTGGCGA CGTTGGAGGC CCGCAAGAGC
GCGCTTGCGG ACCGGTGGGC GTCCGGGAAG ATGGAGGACG ACGCCTACGA CGACGCTCAC
AGGGCCATCG GCCGGCAGAT CCGTGAGGCG CAGACCCGGA TGTACACCAG CGCGCGGCGG
CGCGCCACGC TGCCCGTGGA CGGGGCCGCG GGCTGGGACG CGTTGGGCGA GGACATCGCG
GCGAAGCGGG TGATCCTCAC GCAACTGATC GACGGTGTGA TCGTCGGGGG CAACGGCACC
GTGGAGGGTG ATGATGTTCA GCGGGTGCGG ATCGTGTGGC GTGACCTGAA CGATCCCCGG
TAG
 
Protein sequence
MLRTIGYRRI SDDREGLEAG VTRQDEDIRE HAARRDDIDL IDVLTDNDLS ATKDYRPEFE 
RILVMAAAGE IDAVISWTSN RFFRSAKDRV RVLDLFEAKG IRIIPVRGSE ADPTTADGYL
MVDLMGAIDR AEAKRTAERV SRAAKQRAEQ GRHHGGRRAF GYGPVVATDH LGRPVRDFHA
VIPEETATIR RIAADILAGV PLGSIARALN AAGVPTVTKA HRAACVNNVK GRRAWVDCPC
PYRAWDATTL KELMVNPRLI GMRGYQTRRS RRSTGAIAVM GEAQWPAILD VETWEQVRAI
LTDAARRTNT DAERVRRVLA GFVYCASCGH KLTGNGATGT RLYCQRRDGR CAAKVRIGES
FLVGLVGLAV RERLDVLVLQ PAATADPVAA ELATLEARKS ALADRWASGK MEDDAYDDAH
RAIGRQIREA QTRMYTSARR RATLPVDGAA GWDALGEDIA AKRVILTQLI DGVIVGGNGT
VEGDDVQRVR IVWRDLNDPR