Gene Francci3_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2718 
Symbol 
ID3904708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3203444 
End bp3204160 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content71% 
IMG OID637880042 
Productputative integral membrane protein 
Protein accessionYP_481808 
Protein GI86741408 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCT CGCTGCCGTG GGGTCCGTCG CCGGGCCGGC GTGACCTGCT CGCCCGGCGG 
ATCCGGCTTC TGGTCGGGGT CACGATCGCC TATAACGTCG TCGAGGCCGT CGTCGCGTTG
ACGCTCGGCG CGGCGGCGTC GTCCACCGCG CTGATCGGTT TCGGTTTGGA CTCGGTCATC
GAGGTTTCCT CCGCGGCGGC GGTGGTCTGG CAGTTCTCCG CCTCCGATCA CGCTGTGCGG
GAGGCGCGGG AACGCCGCGC GCTGCGGATC ATCGCGGTGT CGTTCGTGGC GCTCGCGGTC
TATGTCACGG TCAACGTGGT GCGGTCCCTG ACCGGCAGGC AGGACGCGGA CGGTTCGGTG
CCGGGGATCG TCCTGGCCGC GGTGTCGCTG GCGGTGATGC CGTTCCTGTC CGCCGCGCAG
CGCCGGACTG GCCGGGAACT CGGTTCCGCC TCCGCGGTGG CGGACTCGAA GCAGACCCTG
CTGTGTACCT ATCTGTCCGC GGTCCTGCTC GCGGGTCTCC TCCTCAACGC CACCCTCGGC
TGGTCCTGGG CGGACCCTCT CGCAGCTTTG GTGATCGCGG TGATCGCGGT GAAGGAAGGC
CGTGACGCGT GGCGCGGCGA CGTCTGCTGT CCCACCCCGC CGCCGTCATC CGTCCCCGGG
GCCGGTGGGC AGCCGGCCAG GTGCGGATGC GCACCGGGCT GCGTCTGTTG CGGCTGA
 
Protein sequence
MAVSLPWGPS PGRRDLLARR IRLLVGVTIA YNVVEAVVAL TLGAAASSTA LIGFGLDSVI 
EVSSAAAVVW QFSASDHAVR EARERRALRI IAVSFVALAV YVTVNVVRSL TGRQDADGSV
PGIVLAAVSL AVMPFLSAAQ RRTGRELGSA SAVADSKQTL LCTYLSAVLL AGLLLNATLG
WSWADPLAAL VIAVIAVKEG RDAWRGDVCC PTPPPSSVPG AGGQPARCGC APGCVCCG