Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2712 |
Symbol | |
ID | 3904702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3197530 |
End bp | 3198720 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880036 |
Product | transposase, IS4 |
Protein accession | YP_481802 |
Protein GI | 86741402 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGTGG GGGCATTGTC GCGTGACGCG GCCGGTGTGG TGGGAGCCGG CGCGGTGTCG CGTGAGGGAA TCTGGCAGCG GCTGCACGCG ATGGGCGAGC ACCGGGGCCG ACGTGGGCGG GTCTACCCGC TGGCGGTGCT GGCGGCGGTG TGGCTGTGCG CGCTGACCGC GGCGGGCCAT GACCGGGTCA CCGCCGTGAT CGAATGGCTC GCCGGCACCA CGGAGGAGGA ACGGCGCCGG CTGCGGCTGC CGTACGACCC GTTTGACGGC TACCGGCTGC CGAGCGAGTC GACGATCCGC CGGTTCCTCA ACGACACCGA CGACGCGCGG CTCGCCCGCG CACTGCTCGA TCCGCCGCTG GCCGACCCGG CCCCGCCGAA GCCGGCGTCA CCCGAGGCGG CGGGAGAAGC GGTGCGGGCG GTCTACGCAC TGGATGGGAA GACCAGCCGC GGCGCGAAGC GCGCCGACGG GCGGCAGGTC CAACTGGTCG GGGTCGCCGA CCAGGCGACC GGCCGGCTGG TCAACCAGCA CGAGGTGGAC TCGAAGAGCA ATGAGACGAA GGCGTTCCGC CCTGTCCTCG AGCCCCTCGA CCTTGCCTGC GACCTGTTGA CCTTCGACGC TCTGCATACC GTGCGCGACC ATCTCGACTG GCTGGTCACC GACAAGAAGG CCCATTACCT TGCGGTCGTG AAGGGCAACC AGCCAACGCT GCGCGCGTTC CTGGCCGCGT TGCCGTGGGC GGACGTCCCG GTCGCCGACA CCACCCACGA CCATGGCCAC GGCCGTGACG AGACCCGCAC GCTGAAGGCC GCGACCGTCG AGCACGCCGA GTTCCCGCAC GCCCGCCAGG CCGTCCGGAT CCAGCGCTGG CGCCGGGAGA AGGGCAGGAA ACCCAGCCGG GAGACGGTCT ACGGCATCAC GGATCTGGCC TTCGAGCAGG CCTCGGCCGG GTTCCTCGCC GACGCCGCCC GCGGCCAGTG GATCATCGAG AACCGTCAGC ACCACGTCCG TGACGTCACT TTCGGTGAGG ACGCGAGCCG GAGCCGGACC CGCCGCGGCC CGGCCAACCT CGCGATCTTC CGCGCCACTG TCGCGCACGC GGTCCGCGCC GCGGGCCACC GCTACGTTCC GGCCGGGCGC CGGGCCTGCA AGACCGCCAC CGCCGCGCTC GACCTGCACG GCTTTCCCTG A
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Protein sequence | MPVGALSRDA AGVVGAGAVS REGIWQRLHA MGEHRGRRGR VYPLAVLAAV WLCALTAAGH DRVTAVIEWL AGTTEEERRR LRLPYDPFDG YRLPSESTIR RFLNDTDDAR LARALLDPPL ADPAPPKPAS PEAAGEAVRA VYALDGKTSR GAKRADGRQV QLVGVADQAT GRLVNQHEVD SKSNETKAFR PVLEPLDLAC DLLTFDALHT VRDHLDWLVT DKKAHYLAVV KGNQPTLRAF LAALPWADVP VADTTHDHGH GRDETRTLKA ATVEHAEFPH ARQAVRIQRW RREKGRKPSR ETVYGITDLA FEQASAGFLA DAARGQWIIE NRQHHVRDVT FGEDASRSRT RRGPANLAIF RATVAHAVRA AGHRYVPAGR RACKTATAAL DLHGFP
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