| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2691 |
|---|
| Symbol | |
|---|
| ID | 3904915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3178084 |
|---|
| End bp | 3179091 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637880015 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_481781 |
|---|
| Protein GI | 86741381 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.592258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACCT TCAGGATCGG TGCCGGTGCC CTGCGCCGGC TCGAGCTCGC CTTCAAGATC
GTCTGCTTGT CCGGCATCGC CATTGCCCTG GTCTGGTTCC TTCGTGGTCT GGACGTCACC
ACGTTCCGGG AGAGCATCGA GGATGCGTCG CCGGTGCCCC TGCTGCTGGC CTTCGGTACC
AACCTTCTGG TCCAGTACCT GCGGGCCGCC GGCTGGCGGG CGATGCTCGC GCCGCGGCAC
GGGATTTCCC TGCGTCGCCT GGTCCGTCTC GAACTGACGG CCCAGGCTGC GTCGACGATC
TCGCCGGCGC AGGGCGGCGA GATCGTCCGC GCGTGGATGC TGAAGCGGGA CTGTGGCGTC
CCCGCCTCGA CATCCGGCGC GCTCCTCGTT CTGGAGAAAC TGTTCGGCTC GCTCGCCATG
GTCGTTCTGG TGGTCGGGAC TCCATGGCTG ATACCGGGAC TGCCCTGGTG GGTGATCGTC
GCACCGTTCC TGTTCGGGGC GGTCATCTGC GTGCTGCTGC TCGTCCTTGT CCTGTTCGCG
CGGCATCCGC GCGATGCGCA GCAGAGCACC TTCGTCCAGC GGGTGGCCGA CGGTATGTAT
GTGCTGAGAA ACCCCCGGCG CATGCTTGTG ATCTTCTCGT TCGCGGTCCT AGGTGAGCTG
GTCGACCTCG TCGCCGTGAT CCTGGTGATA CACGCGCTCG ACATACACCT CTCCCTTGCC
GAGTCCGTGC TCGTCCTGTT CCTGATTGAT CTCATGAACC TGATACCCGC CGGCCCCGGC
CAGTTCGGCA GTTTCGAGAT CGCCGCGGTT TCCGCCGTCG AGCTGTTTCC GGTACGGCCC
GAGCCGGCCC TTGCGTTTGC CCTGCTCTTC CACCTACAGC AGCAGATTCC GCAGCTTGTG
ATCGGGCTGC CTTTTCTCGT CCGGGTTCCG TTTGGTAGGA TACGACGAGA GCCGGTCGGG
ACGCGAGACG ACGAGTTTTC GGTCGCAAGT CCAGAAGGCC AAAGCTGA
|
|---|
| Protein sequence | MVTFRIGAGA LRRLELAFKI VCLSGIAIAL VWFLRGLDVT TFRESIEDAS PVPLLLAFGT
NLLVQYLRAA GWRAMLAPRH GISLRRLVRL ELTAQAASTI SPAQGGEIVR AWMLKRDCGV
PASTSGALLV LEKLFGSLAM VVLVVGTPWL IPGLPWWVIV APFLFGAVIC VLLLVLVLFA
RHPRDAQQST FVQRVADGMY VLRNPRRMLV IFSFAVLGEL VDLVAVILVI HALDIHLSLA
ESVLVLFLID LMNLIPAGPG QFGSFEIAAV SAVELFPVRP EPALAFALLF HLQQQIPQLV
IGLPFLVRVP FGRIRREPVG TRDDEFSVAS PEGQS
|
|---|
| |