| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2681 |
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| Symbol | |
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| ID | 3904905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3167464 |
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| End bp | 3168249 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880006 |
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| Product | transposase |
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| Protein accession | YP_481772 |
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| Protein GI | 86741372 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.452621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCGGA CCGCAGGCCG CTGGTTCGTG TCGTTCACCG TCGAGGTCGA CCGCGACGTT
CCCGAGCGGC CGTCGCGACG GCAACGCGCG GGCGGCCCCG TCGGCGTCGA CCTCGGCGTG
AAGCACCTCG CCGTTCTGTC GACCGGGCAG ACCGTTCCCA ACCCGAAGCA CTACCAGCGG
GCCGAACGGC GACTGCGCCG GGCGTCGCGG GCCCACGCCC GGTCGAAGCC GGGCAGCGCT
GGGCGGCGGC AGCGCGCCGC CCAGCTCGCG ACGATCCATG TCCGGGTCGC GAACCAGCGC
CACAACGGGC TGCACAAGCT CACGACCCGG CTCGCCCGGT CCCACGACAC GGTCGTCGTC
GAAGATCTGC ACGTCGCCGG GATGGTCCGT AACCGGCGGC TCGCCCGCGC GGTCGCCGAC
GCCGGCATGG CCGAGGTCCG CCGGCAGCTT GCCTACAAGA CCCGCTGGTA CGGATCGACG
CTCGTCGTCG CCGACCGCTG GTATCCCAGC TCGAAGACCT GCTCCGGCTG CGGCTGGCGA
AACCCAAGCC TGACGCTGTC CGAGCGCACC TTCACCTGCC AGTCCTGCGG GCTGGTACTC
GACCGCGACC ACAACGCCGC GATCAACCTG CACCACCTCG TCGCCGCCAG TACACCGGAG
ACGGAAAACG CCCGTGGAGC CGACCAGAAG ACCCGCGCAA GCGGGCAGGT GGCTGGGAAG
CGGGAACCCG GCACGGCCAC GGCCGGTCAG ACCGGGGGCG CCTCGCCGAG AGGCGAGGCG
GCATAG
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| Protein sequence | MSRTAGRWFV SFTVEVDRDV PERPSRRQRA GGPVGVDLGV KHLAVLSTGQ TVPNPKHYQR
AERRLRRASR AHARSKPGSA GRRQRAAQLA TIHVRVANQR HNGLHKLTTR LARSHDTVVV
EDLHVAGMVR NRRLARAVAD AGMAEVRRQL AYKTRWYGST LVVADRWYPS SKTCSGCGWR
NPSLTLSERT FTCQSCGLVL DRDHNAAINL HHLVAASTPE TENARGADQK TRASGQVAGK
REPGTATAGQ TGGASPRGEA A
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